Hb_000696_060

Information

Type -
Description -
Location Contig696: 28195-28839
Sequence    

Annotation

kegg
ID rcu:RCOM_0311070
description hypothetical protein
nr
ID XP_002534041.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T722
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0311070 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000696_060 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000139_360 0.0791771381 - - PREDICTED: uncharacterized protein LOC105631933 [Jatropha curcas]
3 Hb_033187_010 0.0858134421 - - epoxide hydrolase, putative [Ricinus communis]
4 Hb_002387_010 0.0923600392 - - PREDICTED: protein STAY-GREEN LIKE, chloroplastic [Jatropha curcas]
5 Hb_000979_120 0.0946680138 - - Pectinesterase-1 precursor, putative [Ricinus communis]
6 Hb_006132_080 0.0954070618 - - PREDICTED: cytochrome P450 86A8-like [Jatropha curcas]
7 Hb_000589_410 0.0973981981 - - PREDICTED: thylakoid lumenal 15 kDa protein 1, chloroplastic-like isoform X1 [Populus euphratica]
8 Hb_001894_100 0.0975008228 - - PREDICTED: kininogen-1-like [Jatropha curcas]
9 Hb_000046_400 0.1004057914 - - conserved hypothetical protein [Ricinus communis]
10 Hb_029991_010 0.103541575 - - hypothetical protein PRUPE_ppa001615mg [Prunus persica]
11 Hb_000251_150 0.1056575115 - - PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
12 Hb_003186_030 0.1064532613 transcription factor TF Family: MYB hypothetical protein POPTR_0012s05720g [Populus trichocarpa]
13 Hb_002805_280 0.1070085868 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
14 Hb_002042_210 0.1070922213 - - PREDICTED: UPF0603 protein At1g54780, chloroplastic [Jatropha curcas]
15 Hb_003151_020 0.1078440674 - - Ankyrin repeat family protein, putative [Theobroma cacao]
16 Hb_158001_010 0.1084401008 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
17 Hb_007317_030 0.1088431983 - - -
18 Hb_000179_010 0.1094699328 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
19 Hb_131466_010 0.1096288762 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
20 Hb_011618_010 0.1098823906 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]

Gene co-expression network

sample Hb_000696_060 Hb_000696_060 Hb_000139_360 Hb_000139_360 Hb_000696_060--Hb_000139_360 Hb_033187_010 Hb_033187_010 Hb_000696_060--Hb_033187_010 Hb_002387_010 Hb_002387_010 Hb_000696_060--Hb_002387_010 Hb_000979_120 Hb_000979_120 Hb_000696_060--Hb_000979_120 Hb_006132_080 Hb_006132_080 Hb_000696_060--Hb_006132_080 Hb_000589_410 Hb_000589_410 Hb_000696_060--Hb_000589_410 Hb_008195_090 Hb_008195_090 Hb_000139_360--Hb_008195_090 Hb_044478_010 Hb_044478_010 Hb_000139_360--Hb_044478_010 Hb_172426_070 Hb_172426_070 Hb_000139_360--Hb_172426_070 Hb_029991_010 Hb_029991_010 Hb_000139_360--Hb_029991_010 Hb_000139_360--Hb_002387_010 Hb_000497_050 Hb_000497_050 Hb_033187_010--Hb_000497_050 Hb_011724_040 Hb_011724_040 Hb_033187_010--Hb_011724_040 Hb_000179_010 Hb_000179_010 Hb_033187_010--Hb_000179_010 Hb_002752_020 Hb_002752_020 Hb_033187_010--Hb_002752_020 Hb_033187_010--Hb_006132_080 Hb_002121_050 Hb_002121_050 Hb_033187_010--Hb_002121_050 Hb_002805_280 Hb_002805_280 Hb_002387_010--Hb_002805_280 Hb_004607_110 Hb_004607_110 Hb_002387_010--Hb_004607_110 Hb_002387_010--Hb_008195_090 Hb_002387_010--Hb_044478_010 Hb_002387_010--Hb_029991_010 Hb_003913_120 Hb_003913_120 Hb_002387_010--Hb_003913_120 Hb_000987_030 Hb_000987_030 Hb_000979_120--Hb_000987_030 Hb_000251_150 Hb_000251_150 Hb_000979_120--Hb_000251_150 Hb_005743_050 Hb_005743_050 Hb_000979_120--Hb_005743_050 Hb_001049_130 Hb_001049_130 Hb_000979_120--Hb_001049_130 Hb_029879_020 Hb_029879_020 Hb_000979_120--Hb_029879_020 Hb_031862_220 Hb_031862_220 Hb_000979_120--Hb_031862_220 Hb_006132_080--Hb_002121_050 Hb_003186_030 Hb_003186_030 Hb_006132_080--Hb_003186_030 Hb_004452_070 Hb_004452_070 Hb_006132_080--Hb_004452_070 Hb_006132_080--Hb_000251_150 Hb_006132_080--Hb_000179_010 Hb_006132_080--Hb_011724_040 Hb_002659_050 Hb_002659_050 Hb_000589_410--Hb_002659_050 Hb_000185_010 Hb_000185_010 Hb_000589_410--Hb_000185_010 Hb_011618_010 Hb_011618_010 Hb_000589_410--Hb_011618_010 Hb_000589_410--Hb_006132_080 Hb_000589_410--Hb_003186_030 Hb_005348_050 Hb_005348_050 Hb_000589_410--Hb_005348_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.58691 3.21883 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.128593 0 0.216636 8.64055

CAGE analysis