Hb_000696_200

Information

Type -
Description -
Location Contig696: 122761-126190
Sequence    

Annotation

kegg
ID pxb:103967775
description GDSL esterase/lipase EXL3-like
nr
ID XP_012088493.1
description PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
swissprot
ID Q94CH6
description GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1
trembl
ID A0A067JMD7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25376 PE=4 SV=1
Gene Ontology
ID GO:0016298
description gdsl esterase lipase exl3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54592: 122656-126153
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000696_200 0.0 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
2 Hb_003228_060 0.0171551477 - - conserved hypothetical protein [Ricinus communis]
3 Hb_083242_040 0.0329789571 - - -
4 Hb_001715_050 0.036263891 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Jatropha curcas]
5 Hb_002997_060 0.0377534542 - - hypothetical protein POPTR_0011s10730g [Populus trichocarpa]
6 Hb_034168_060 0.0427291924 - - ribulose-1-5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Cucumis argenteus]
7 Hb_006272_010 0.0530912557 - - PREDICTED: cytochrome P450 86B1 [Vitis vinifera]
8 Hb_005171_020 0.0559238409 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.7 [Jatropha curcas]
9 Hb_008489_030 0.0597451227 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
10 Hb_043327_010 0.0610035128 - - PREDICTED: uncharacterized protein LOC105785093, partial [Gossypium raimondii]
11 Hb_015981_010 0.0636694585 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_000893_040 0.0733634536 transcription factor TF Family: bHLH hypothetical protein POPTR_0011s05320g [Populus trichocarpa]
13 Hb_006331_010 0.0751633618 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
14 Hb_003947_020 0.0796314079 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
15 Hb_003407_050 0.0879786279 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
16 Hb_183479_030 0.0879926485 - - Photosystem I reaction center subunit V, chloroplast precursor, putative [Ricinus communis]
17 Hb_007645_040 0.0903555566 - - ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Tachigali myrmecophila]
18 Hb_009095_020 0.0924963314 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
19 Hb_004138_020 0.0935131824 - - PREDICTED: cucumisin-like [Populus euphratica]
20 Hb_048694_010 0.0941518084 - - catalytic, putative [Ricinus communis]

Gene co-expression network

sample Hb_000696_200 Hb_000696_200 Hb_003228_060 Hb_003228_060 Hb_000696_200--Hb_003228_060 Hb_083242_040 Hb_083242_040 Hb_000696_200--Hb_083242_040 Hb_001715_050 Hb_001715_050 Hb_000696_200--Hb_001715_050 Hb_002997_060 Hb_002997_060 Hb_000696_200--Hb_002997_060 Hb_034168_060 Hb_034168_060 Hb_000696_200--Hb_034168_060 Hb_006272_010 Hb_006272_010 Hb_000696_200--Hb_006272_010 Hb_003228_060--Hb_083242_040 Hb_003228_060--Hb_001715_050 Hb_003228_060--Hb_006272_010 Hb_003228_060--Hb_002997_060 Hb_003228_060--Hb_034168_060 Hb_083242_040--Hb_001715_050 Hb_083242_040--Hb_006272_010 Hb_005171_020 Hb_005171_020 Hb_083242_040--Hb_005171_020 Hb_083242_040--Hb_034168_060 Hb_001715_050--Hb_006272_010 Hb_001715_050--Hb_005171_020 Hb_043327_010 Hb_043327_010 Hb_001715_050--Hb_043327_010 Hb_008489_030 Hb_008489_030 Hb_002997_060--Hb_008489_030 Hb_002997_060--Hb_043327_010 Hb_002997_060--Hb_005171_020 Hb_000893_040 Hb_000893_040 Hb_002997_060--Hb_000893_040 Hb_034168_060--Hb_001715_050 Hb_007645_040 Hb_007645_040 Hb_034168_060--Hb_007645_040 Hb_006331_010 Hb_006331_010 Hb_034168_060--Hb_006331_010 Hb_006272_010--Hb_005171_020 Hb_006272_010--Hb_043327_010 Hb_183479_030 Hb_183479_030 Hb_006272_010--Hb_183479_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 51.4406 53.0416 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.141598 888.289

CAGE analysis