Hb_000699_220

Information

Type -
Description -
Location Contig699: 225449-226337
Sequence    

Annotation

kegg
ID egr:104415388
description uncharacterized LOC104415388
nr
ID XP_012067554.1
description PREDICTED: phospholipid-metabolizing enzyme A-C1-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LCI5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26802 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54698: 225544-226497
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000699_220 0.0 - - PREDICTED: phospholipid-metabolizing enzyme A-C1-like [Jatropha curcas]
2 Hb_006717_060 0.0526298688 - - PREDICTED: peroxidase 42 [Jatropha curcas]
3 Hb_012114_090 0.0542571585 - - tubulin beta chain, putative [Ricinus communis]
4 Hb_000497_030 0.0572618595 - - -
5 Hb_001349_040 0.0611777065 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Populus euphratica]
6 Hb_000336_120 0.0634124891 - - PREDICTED: mavicyanin [Populus euphratica]
7 Hb_005616_020 0.0641842203 - - kinase, putative [Ricinus communis]
8 Hb_071079_040 0.0695836948 - - PREDICTED: bidirectional sugar transporter SWEET3 [Jatropha curcas]
9 Hb_000310_050 0.0729257086 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
10 Hb_001104_060 0.0740098424 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
11 Hb_001456_030 0.0772616181 - - PREDICTED: bifunctional pinoresinol-lariciresinol reductase 2 [Vitis vinifera]
12 Hb_003580_020 0.0777059841 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000083_200 0.0795747778 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001369_480 0.0797865031 transcription factor TF Family: NAC hypothetical protein POPTR_0012s14660g [Populus trichocarpa]
15 Hb_000462_120 0.0824878998 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105642310 [Jatropha curcas]
16 Hb_000531_030 0.0842627673 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003376_060 0.0876026429 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9 isoform X1 [Jatropha curcas]
18 Hb_009079_010 0.0906931496 - - JHL18I08.8 [Jatropha curcas]
19 Hb_031330_010 0.0916312754 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]
20 Hb_000608_090 0.0938856412 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000699_220 Hb_000699_220 Hb_006717_060 Hb_006717_060 Hb_000699_220--Hb_006717_060 Hb_012114_090 Hb_012114_090 Hb_000699_220--Hb_012114_090 Hb_000497_030 Hb_000497_030 Hb_000699_220--Hb_000497_030 Hb_001349_040 Hb_001349_040 Hb_000699_220--Hb_001349_040 Hb_000336_120 Hb_000336_120 Hb_000699_220--Hb_000336_120 Hb_005616_020 Hb_005616_020 Hb_000699_220--Hb_005616_020 Hb_006717_060--Hb_000497_030 Hb_003580_020 Hb_003580_020 Hb_006717_060--Hb_003580_020 Hb_006717_060--Hb_012114_090 Hb_006717_060--Hb_001349_040 Hb_006717_060--Hb_000336_120 Hb_012114_090--Hb_000336_120 Hb_001369_480 Hb_001369_480 Hb_012114_090--Hb_001369_480 Hb_000310_050 Hb_000310_050 Hb_012114_090--Hb_000310_050 Hb_001456_030 Hb_001456_030 Hb_012114_090--Hb_001456_030 Hb_000497_030--Hb_003580_020 Hb_071079_040 Hb_071079_040 Hb_000497_030--Hb_071079_040 Hb_000497_030--Hb_001349_040 Hb_000083_200 Hb_000083_200 Hb_000497_030--Hb_000083_200 Hb_001349_040--Hb_000083_200 Hb_112950_010 Hb_112950_010 Hb_001349_040--Hb_112950_010 Hb_001349_040--Hb_000310_050 Hb_015175_070 Hb_015175_070 Hb_000336_120--Hb_015175_070 Hb_000336_120--Hb_000310_050 Hb_000336_120--Hb_001369_480 Hb_005616_020--Hb_001456_030 Hb_000462_120 Hb_000462_120 Hb_005616_020--Hb_000462_120 Hb_003376_060 Hb_003376_060 Hb_005616_020--Hb_003376_060 Hb_000413_030 Hb_000413_030 Hb_005616_020--Hb_000413_030 Hb_000608_090 Hb_000608_090 Hb_005616_020--Hb_000608_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.581028 2.03512 17.7028 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0607102 5.0621

CAGE analysis