Hb_000702_080

Information

Type -
Description -
Location Contig702: 122135-123474
Sequence    

Annotation

kegg
ID rcu:RCOM_0837840
description hypothetical protein
nr
ID XP_012067706.1
description PREDICTED: uncharacterized protein LOC105630492 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9U4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15652 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000702_080 0.0 - - PREDICTED: uncharacterized protein LOC105630492 [Jatropha curcas]
2 Hb_004241_020 0.0936307299 - - PREDICTED: DAG protein, chloroplastic-like [Jatropha curcas]
3 Hb_005237_050 0.1191402675 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105630924 [Jatropha curcas]
4 Hb_000107_570 0.1246059097 - - PREDICTED: uncharacterized protein LOC105634044 isoform X1 [Jatropha curcas]
5 Hb_002217_260 0.1259227713 - - PREDICTED: uncharacterized protein LOC105643577 [Jatropha curcas]
6 Hb_000130_260 0.127140124 rubber biosynthesis Gene Name: Dimethyallyltransferase PREDICTED: tRNA dimethylallyltransferase 9 isoform X1 [Jatropha curcas]
7 Hb_000297_150 0.1311149599 - - PREDICTED: uncharacterized protein LOC103500908 [Cucumis melo]
8 Hb_000462_090 0.1335152437 - - PREDICTED: carotene epsilon-monooxygenase, chloroplastic [Jatropha curcas]
9 Hb_000087_140 0.1342655011 - - PREDICTED: pentatricopeptide repeat-containing protein At5g27270 isoform X1 [Jatropha curcas]
10 Hb_006420_050 0.1344390913 - - helicase, putative [Ricinus communis]
11 Hb_012146_030 0.1417471958 - - -
12 Hb_000465_190 0.1434964864 - - PREDICTED: E3 ubiquitin-protein ligase HOS1 isoform X2 [Jatropha curcas]
13 Hb_002758_010 0.1454681514 - - PREDICTED: ribonuclease II, chloroplastic/mitochondrial [Populus euphratica]
14 Hb_006117_040 0.1466013808 - - PREDICTED: seed biotin-containing protein SBP65 [Jatropha curcas]
15 Hb_093458_060 0.1467088488 - - PREDICTED: uncharacterized protein LOC105633194 [Jatropha curcas]
16 Hb_000173_250 0.1487549879 - - PREDICTED: ribonucleoside-diphosphate reductase small chain A [Jatropha curcas]
17 Hb_005253_030 0.1527644162 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_001080_090 0.1539908152 - - PREDICTED: BTB/POZ domain-containing protein At2g30600 isoform X1 [Jatropha curcas]
19 Hb_001790_080 0.1541163809 - - PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X3 [Jatropha curcas]
20 Hb_015941_020 0.1546642763 - - -

Gene co-expression network

sample Hb_000702_080 Hb_000702_080 Hb_004241_020 Hb_004241_020 Hb_000702_080--Hb_004241_020 Hb_005237_050 Hb_005237_050 Hb_000702_080--Hb_005237_050 Hb_000107_570 Hb_000107_570 Hb_000702_080--Hb_000107_570 Hb_002217_260 Hb_002217_260 Hb_000702_080--Hb_002217_260 Hb_000130_260 Hb_000130_260 Hb_000702_080--Hb_000130_260 Hb_000297_150 Hb_000297_150 Hb_000702_080--Hb_000297_150 Hb_004241_020--Hb_000297_150 Hb_000173_250 Hb_000173_250 Hb_004241_020--Hb_000173_250 Hb_000580_150 Hb_000580_150 Hb_004241_020--Hb_000580_150 Hb_000465_190 Hb_000465_190 Hb_004241_020--Hb_000465_190 Hb_009775_010 Hb_009775_010 Hb_004241_020--Hb_009775_010 Hb_003020_220 Hb_003020_220 Hb_005237_050--Hb_003020_220 Hb_006420_050 Hb_006420_050 Hb_005237_050--Hb_006420_050 Hb_001049_110 Hb_001049_110 Hb_005237_050--Hb_001049_110 Hb_005116_050 Hb_005116_050 Hb_005237_050--Hb_005116_050 Hb_082609_010 Hb_082609_010 Hb_005237_050--Hb_082609_010 Hb_018133_090 Hb_018133_090 Hb_005237_050--Hb_018133_090 Hb_000028_110 Hb_000028_110 Hb_000107_570--Hb_000028_110 Hb_000622_240 Hb_000622_240 Hb_000107_570--Hb_000622_240 Hb_000462_090 Hb_000462_090 Hb_000107_570--Hb_000462_090 Hb_003666_030 Hb_003666_030 Hb_000107_570--Hb_003666_030 Hb_006117_040 Hb_006117_040 Hb_000107_570--Hb_006117_040 Hb_002217_260--Hb_000462_090 Hb_001584_200 Hb_001584_200 Hb_002217_260--Hb_001584_200 Hb_036790_080 Hb_036790_080 Hb_002217_260--Hb_036790_080 Hb_002217_260--Hb_009775_010 Hb_000080_120 Hb_000080_120 Hb_002217_260--Hb_000080_120 Hb_021346_030 Hb_021346_030 Hb_002217_260--Hb_021346_030 Hb_029584_070 Hb_029584_070 Hb_000130_260--Hb_029584_070 Hb_001790_080 Hb_001790_080 Hb_000130_260--Hb_001790_080 Hb_002758_010 Hb_002758_010 Hb_000130_260--Hb_002758_010 Hb_001936_090 Hb_001936_090 Hb_000130_260--Hb_001936_090 Hb_001080_090 Hb_001080_090 Hb_000130_260--Hb_001080_090 Hb_004899_260 Hb_004899_260 Hb_000130_260--Hb_004899_260 Hb_000340_100 Hb_000340_100 Hb_000297_150--Hb_000340_100 Hb_000297_150--Hb_000465_190 Hb_003747_230 Hb_003747_230 Hb_000297_150--Hb_003747_230 Hb_000297_150--Hb_000173_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.57583 2.61695 2.99547 1.02795 3.35517 3.60363
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.88068 6.14637 3.73251 2.04811 12.4416

CAGE analysis