Hb_000703_110

Information

Type -
Description -
Location Contig703: 128800-130502
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0008152
description bifunctional riboflavin kinase fmn phosphatase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54925: 112904-130516
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000703_110 0.0 - - -
2 Hb_008054_050 0.2018812608 - - PREDICTED: uncharacterized protein LOC101212042 [Cucumis sativus]
3 Hb_006642_030 0.2020127508 - - PREDICTED: germin-like protein subfamily 3 member 2 [Jatropha curcas]
4 Hb_000245_080 0.2114420805 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-15 [Jatropha curcas]
5 Hb_000311_030 0.2156275801 - - hypothetical protein B456_002G227600 [Gossypium raimondii]
6 Hb_000111_030 0.2211233712 - - PREDICTED: uncharacterized protein LOC104094030 [Nicotiana tomentosiformis]
7 Hb_011287_040 0.2242377017 - - PREDICTED: OTU domain-containing protein At3g57810-like isoform X1 [Jatropha curcas]
8 Hb_002344_130 0.2258458154 - - PREDICTED: copper transporter 5 [Jatropha curcas]
9 Hb_002388_010 0.2287917344 - - -
10 Hb_000004_010 0.2319414265 - - hypothetical protein Csa_6G120400 [Cucumis sativus]
11 Hb_001217_040 0.2321947493 - - hypothetical protein MIMGU_mgv1a0002421mg, partial [Erythranthe guttata]
12 Hb_000856_060 0.2343250513 - - -
13 Hb_130323_010 0.2345606265 - - Myosin heavy chain, fast skeletal muscle, embryonic, putative [Ricinus communis]
14 Hb_002760_050 0.2396974103 - - conserved hypothetical protein [Ricinus communis]
15 Hb_009189_020 0.2437361486 - - PREDICTED: CASP-like protein 4B4 [Jatropha curcas]
16 Hb_000720_080 0.2437996194 - - PREDICTED: bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Jatropha curcas]
17 Hb_005694_010 0.2471971539 transcription factor TF Family: C2C2-Dof F-box family protein, putative isoform 1 [Theobroma cacao]
18 Hb_003551_010 0.2487638319 - - hypothetical protein CISIN_1g030786mg [Citrus sinensis]
19 Hb_000359_140 0.2492027548 - - PREDICTED: transmembrane protein 56-like [Jatropha curcas]
20 Hb_088163_010 0.2496978736 - - PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]

Gene co-expression network

sample Hb_000703_110 Hb_000703_110 Hb_008054_050 Hb_008054_050 Hb_000703_110--Hb_008054_050 Hb_006642_030 Hb_006642_030 Hb_000703_110--Hb_006642_030 Hb_000245_080 Hb_000245_080 Hb_000703_110--Hb_000245_080 Hb_000311_030 Hb_000311_030 Hb_000703_110--Hb_000311_030 Hb_000111_030 Hb_000111_030 Hb_000703_110--Hb_000111_030 Hb_011287_040 Hb_011287_040 Hb_000703_110--Hb_011287_040 Hb_145317_010 Hb_145317_010 Hb_008054_050--Hb_145317_010 Hb_004374_130 Hb_004374_130 Hb_008054_050--Hb_004374_130 Hb_161994_040 Hb_161994_040 Hb_008054_050--Hb_161994_040 Hb_008054_050--Hb_000311_030 Hb_002498_050 Hb_002498_050 Hb_008054_050--Hb_002498_050 Hb_001217_040 Hb_001217_040 Hb_008054_050--Hb_001217_040 Hb_006642_030--Hb_000311_030 Hb_006642_030--Hb_161994_040 Hb_000311_040 Hb_000311_040 Hb_006642_030--Hb_000311_040 Hb_006642_030--Hb_008054_050 Hb_002344_130 Hb_002344_130 Hb_006642_030--Hb_002344_130 Hb_000003_540 Hb_000003_540 Hb_000245_080--Hb_000003_540 Hb_024879_010 Hb_024879_010 Hb_000245_080--Hb_024879_010 Hb_005539_310 Hb_005539_310 Hb_000245_080--Hb_005539_310 Hb_006065_050 Hb_006065_050 Hb_000245_080--Hb_006065_050 Hb_000359_140 Hb_000359_140 Hb_000245_080--Hb_000359_140 Hb_000245_080--Hb_001217_040 Hb_000311_030--Hb_161994_040 Hb_065841_010 Hb_065841_010 Hb_000311_030--Hb_065841_010 Hb_068569_010 Hb_068569_010 Hb_000311_030--Hb_068569_010 Hb_013358_100 Hb_013358_100 Hb_000311_030--Hb_013358_100 Hb_002388_010 Hb_002388_010 Hb_000111_030--Hb_002388_010 Hb_130613_010 Hb_130613_010 Hb_000111_030--Hb_130613_010 Hb_001747_030 Hb_001747_030 Hb_000111_030--Hb_001747_030 Hb_182713_020 Hb_182713_020 Hb_000111_030--Hb_182713_020 Hb_000111_030--Hb_002344_130 Hb_002192_090 Hb_002192_090 Hb_000111_030--Hb_002192_090 Hb_011287_040--Hb_182713_020 Hb_001518_070 Hb_001518_070 Hb_011287_040--Hb_001518_070 Hb_008185_020 Hb_008185_020 Hb_011287_040--Hb_008185_020 Hb_000053_030 Hb_000053_030 Hb_011287_040--Hb_000053_030 Hb_073799_010 Hb_073799_010 Hb_011287_040--Hb_073799_010 Hb_013394_100 Hb_013394_100 Hb_011287_040--Hb_013394_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.82529 1.11163 0.481709 6.83574 1.81052 1.3644
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.679503 1.6044 0 0.739241 0.422071

CAGE analysis