Hb_000720_110

Information

Type -
Description -
Location Contig720: 145172-145438
Sequence    

Annotation

kegg
ID pop:POPTR_0001s09050g
description POPTRDRAFT_548494; hypothetical protein
nr
ID KDP25472.1
description hypothetical protein JCGZ_20628 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JNL2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20628 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000720_110 0.0 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
2 Hb_001481_030 0.1118600789 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_005306_040 0.1120801719 - - calmodulin binding protein, putative [Ricinus communis]
4 Hb_000692_180 0.1128055341 - - PREDICTED: uncharacterized protein At1g76070 [Jatropha curcas]
5 Hb_165404_010 0.1222631805 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
6 Hb_055147_010 0.1245455648 - - thioredoxin H-type 7 [Hevea brasiliensis]
7 Hb_000075_110 0.1377723647 - - aldo-keto reductase, putative [Ricinus communis]
8 Hb_000046_590 0.1383618563 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
9 Hb_001424_080 0.1391973738 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
10 Hb_034342_010 0.1403351231 - - conserved hypothetical protein [Ricinus communis]
11 Hb_008215_010 0.1448327408 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001663_100 0.1576591032 - - -
13 Hb_007765_140 0.1584622372 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
14 Hb_000223_050 0.1620984382 - - PREDICTED: endochitinase A-like [Jatropha curcas]
15 Hb_000598_020 0.1629086631 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
16 Hb_000836_390 0.1744883143 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
17 Hb_000343_280 0.177549642 - - hypothetical protein JCGZ_24094 [Jatropha curcas]
18 Hb_006634_080 0.1776595234 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-3b [Jatropha curcas]
19 Hb_001922_020 0.1777560976 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000676_030 0.1855687642 - - PREDICTED: probable mitochondrial chaperone BCS1-B [Jatropha curcas]

Gene co-expression network

sample Hb_000720_110 Hb_000720_110 Hb_001481_030 Hb_001481_030 Hb_000720_110--Hb_001481_030 Hb_005306_040 Hb_005306_040 Hb_000720_110--Hb_005306_040 Hb_000692_180 Hb_000692_180 Hb_000720_110--Hb_000692_180 Hb_165404_010 Hb_165404_010 Hb_000720_110--Hb_165404_010 Hb_055147_010 Hb_055147_010 Hb_000720_110--Hb_055147_010 Hb_000075_110 Hb_000075_110 Hb_000720_110--Hb_000075_110 Hb_001424_080 Hb_001424_080 Hb_001481_030--Hb_001424_080 Hb_000223_050 Hb_000223_050 Hb_001481_030--Hb_000223_050 Hb_001481_030--Hb_005306_040 Hb_034342_010 Hb_034342_010 Hb_001481_030--Hb_034342_010 Hb_000512_080 Hb_000512_080 Hb_001481_030--Hb_000512_080 Hb_000343_280 Hb_000343_280 Hb_005306_040--Hb_000343_280 Hb_005306_040--Hb_055147_010 Hb_100873_040 Hb_100873_040 Hb_005306_040--Hb_100873_040 Hb_005306_040--Hb_000692_180 Hb_001663_100 Hb_001663_100 Hb_000692_180--Hb_001663_100 Hb_000692_180--Hb_001424_080 Hb_000692_180--Hb_034342_010 Hb_000462_020 Hb_000462_020 Hb_000692_180--Hb_000462_020 Hb_022998_010 Hb_022998_010 Hb_000692_180--Hb_022998_010 Hb_165404_010--Hb_000075_110 Hb_007765_140 Hb_007765_140 Hb_165404_010--Hb_007765_140 Hb_065230_010 Hb_065230_010 Hb_165404_010--Hb_065230_010 Hb_008215_010 Hb_008215_010 Hb_165404_010--Hb_008215_010 Hb_075449_040 Hb_075449_040 Hb_165404_010--Hb_075449_040 Hb_000120_070 Hb_000120_070 Hb_165404_010--Hb_000120_070 Hb_004785_120 Hb_004785_120 Hb_055147_010--Hb_004785_120 Hb_012404_050 Hb_012404_050 Hb_055147_010--Hb_012404_050 Hb_000996_200 Hb_000996_200 Hb_055147_010--Hb_000996_200 Hb_000110_330 Hb_000110_330 Hb_055147_010--Hb_000110_330 Hb_000862_060 Hb_000862_060 Hb_055147_010--Hb_000862_060 Hb_000075_110--Hb_007765_140 Hb_000598_020 Hb_000598_020 Hb_000075_110--Hb_000598_020 Hb_000075_110--Hb_000120_070 Hb_000075_110--Hb_008215_010 Hb_006970_150 Hb_006970_150 Hb_000075_110--Hb_006970_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.5045 3.05516 1.65826 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.74011 0

CAGE analysis