Hb_000720_180

Information

Type -
Description -
Location Contig720: 207570-209527
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000720_180 0.0 - - -
2 Hb_003018_180 0.1367835389 - - PREDICTED: WEB family protein At3g51220-like [Jatropha curcas]
3 Hb_004545_150 0.1378277961 - - PREDICTED: paramyosin [Jatropha curcas]
4 Hb_029879_080 0.1457529739 - - unknown [Populus trichocarpa]
5 Hb_001631_070 0.148564398 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
6 Hb_002301_020 0.1548337987 transcription factor TF Family: NAC NAC transcription factor [Hevea brasiliensis]
7 Hb_003745_010 0.1575068896 transcription factor TF Family: AP2 hypothetical protein JCGZ_03155 [Jatropha curcas]
8 Hb_000784_130 0.1591241709 - - hypothetical protein JCGZ_22813 [Jatropha curcas]
9 Hb_000130_390 0.1619085923 - - PREDICTED: glutamate receptor 2.8-like [Pyrus x bretschneideri]
10 Hb_019516_040 0.1632028192 desease resistance Gene Name: AAA Katanin p60 ATPase-containing subunit, putative [Ricinus communis]
11 Hb_001140_160 0.1646832121 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
12 Hb_001425_120 0.1650351319 - - PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
13 Hb_002298_040 0.1670631745 - - PREDICTED: uncharacterized protein LOC105633642 [Jatropha curcas]
14 Hb_010931_100 0.1672246387 - - PREDICTED: uncharacterized protein LOC105638669 [Jatropha curcas]
15 Hb_001892_150 0.1686347734 - - -
16 Hb_010578_090 0.1690502729 - - HEV2.1 [Hevea brasiliensis]
17 Hb_072912_010 0.1725928153 - - PREDICTED: uncharacterized protein LOC105641750 [Jatropha curcas]
18 Hb_010872_060 0.1730309654 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
19 Hb_000997_260 0.1733665751 - - PREDICTED: rRNA-processing protein EFG1 isoform X1 [Jatropha curcas]
20 Hb_000563_540 0.1745073132 - - PREDICTED: Fanconi anemia group I protein [Jatropha curcas]

Gene co-expression network

sample Hb_000720_180 Hb_000720_180 Hb_003018_180 Hb_003018_180 Hb_000720_180--Hb_003018_180 Hb_004545_150 Hb_004545_150 Hb_000720_180--Hb_004545_150 Hb_029879_080 Hb_029879_080 Hb_000720_180--Hb_029879_080 Hb_001631_070 Hb_001631_070 Hb_000720_180--Hb_001631_070 Hb_002301_020 Hb_002301_020 Hb_000720_180--Hb_002301_020 Hb_003745_010 Hb_003745_010 Hb_000720_180--Hb_003745_010 Hb_000130_390 Hb_000130_390 Hb_003018_180--Hb_000130_390 Hb_001140_160 Hb_001140_160 Hb_003018_180--Hb_001140_160 Hb_000957_040 Hb_000957_040 Hb_003018_180--Hb_000957_040 Hb_002298_040 Hb_002298_040 Hb_003018_180--Hb_002298_040 Hb_003018_180--Hb_004545_150 Hb_001780_060 Hb_001780_060 Hb_003018_180--Hb_001780_060 Hb_010931_100 Hb_010931_100 Hb_004545_150--Hb_010931_100 Hb_002609_260 Hb_002609_260 Hb_004545_150--Hb_002609_260 Hb_002989_080 Hb_002989_080 Hb_004545_150--Hb_002989_080 Hb_000264_190 Hb_000264_190 Hb_004545_150--Hb_000264_190 Hb_005488_100 Hb_005488_100 Hb_004545_150--Hb_005488_100 Hb_000563_540 Hb_000563_540 Hb_004545_150--Hb_000563_540 Hb_010578_090 Hb_010578_090 Hb_029879_080--Hb_010578_090 Hb_029879_080--Hb_002298_040 Hb_005016_130 Hb_005016_130 Hb_029879_080--Hb_005016_130 Hb_115919_020 Hb_115919_020 Hb_029879_080--Hb_115919_020 Hb_000284_010 Hb_000284_010 Hb_029879_080--Hb_000284_010 Hb_002221_080 Hb_002221_080 Hb_029879_080--Hb_002221_080 Hb_010872_060 Hb_010872_060 Hb_001631_070--Hb_010872_060 Hb_001631_070--Hb_000957_040 Hb_000762_020 Hb_000762_020 Hb_001631_070--Hb_000762_020 Hb_012347_010 Hb_012347_010 Hb_001631_070--Hb_012347_010 Hb_124315_040 Hb_124315_040 Hb_001631_070--Hb_124315_040 Hb_001631_070--Hb_003745_010 Hb_000155_070 Hb_000155_070 Hb_002301_020--Hb_000155_070 Hb_000442_030 Hb_000442_030 Hb_002301_020--Hb_000442_030 Hb_002301_020--Hb_000563_540 Hb_002301_020--Hb_005488_100 Hb_000571_070 Hb_000571_070 Hb_002301_020--Hb_000571_070 Hb_002301_020--Hb_010931_100 Hb_019516_040 Hb_019516_040 Hb_003745_010--Hb_019516_040 Hb_003745_010--Hb_000130_390 Hb_003745_010--Hb_012347_010 Hb_003745_010--Hb_003018_180 Hb_027751_040 Hb_027751_040 Hb_003745_010--Hb_027751_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.26121 0 0 0 0.513666 0.848445
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.2477 0.30174 0.662933 0.0308744 0

CAGE analysis