Hb_000723_260

Information

Type -
Description -
Location Contig723: 235374-245378
Sequence    

Annotation

kegg
ID rcu:RCOM_1355490
description ethylene insensitive protein, putative
nr
ID XP_002519522.1
description ethylene insensitive protein, putative [Ricinus communis]
swissprot
ID Q9S814
description Ethylene-insensitive protein 2 OS=Arabidopsis thaliana GN=EIN2 PE=1 SV=1
trembl
ID B9S0K3
description Ethylene insensitive protein, putative OS=Ricinus communis GN=RCOM_1355490 PE=4 SV=1
Gene Ontology
ID GO:0016020
description ethylene-insensitive protein 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55780: 235477-245335
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000723_260 0.0 - - ethylene insensitive protein, putative [Ricinus communis]
2 Hb_000152_820 0.084547423 - - PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial [Jatropha curcas]
3 Hb_000538_200 0.0853226935 - - PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like [Jatropha curcas]
4 Hb_002150_030 0.0869206946 - - PREDICTED: protein SPA1-RELATED 2 [Jatropha curcas]
5 Hb_000317_020 0.0892203362 - - PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1 [Jatropha curcas]
6 Hb_007586_030 0.0910572732 - - PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like isoform X1 [Jatropha curcas]
7 Hb_007757_110 0.0928022921 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
8 Hb_010710_010 0.0941018036 - - pumilio/Puf RNA-binding domain-containing family protein [Populus trichocarpa]
9 Hb_003030_020 0.094761492 - - PREDICTED: uncharacterized protein LOC105632544 [Jatropha curcas]
10 Hb_004600_040 0.0957675507 - - -
11 Hb_010175_020 0.0960115353 - - PREDICTED: cysteine desulfurase, mitochondrial isoform X1 [Jatropha curcas]
12 Hb_000815_210 0.0961618878 - - uncoupling protein 3, partial [Manihot esculenta]
13 Hb_001736_040 0.0976864041 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]
14 Hb_000244_160 0.0994093527 - - PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Jatropha curcas]
15 Hb_000977_180 0.0996234579 - - PREDICTED: splicing factor U2AF-associated protein 2 isoform X1 [Jatropha curcas]
16 Hb_000086_590 0.0998348303 - - PREDICTED: putative uncharacterized protein At4g01020, chloroplastic [Jatropha curcas]
17 Hb_001252_080 0.1003119388 - - PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Jatropha curcas]
18 Hb_034271_030 0.1004010765 - - PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Jatropha curcas]
19 Hb_008695_180 0.1016898264 - - eukaryotic translation initiation factor [Hevea brasiliensis]
20 Hb_000005_380 0.1039267521 - - PREDICTED: uncharacterized protein LOC105634023 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000723_260 Hb_000723_260 Hb_000152_820 Hb_000152_820 Hb_000723_260--Hb_000152_820 Hb_000538_200 Hb_000538_200 Hb_000723_260--Hb_000538_200 Hb_002150_030 Hb_002150_030 Hb_000723_260--Hb_002150_030 Hb_000317_020 Hb_000317_020 Hb_000723_260--Hb_000317_020 Hb_007586_030 Hb_007586_030 Hb_000723_260--Hb_007586_030 Hb_007757_110 Hb_007757_110 Hb_000723_260--Hb_007757_110 Hb_010175_020 Hb_010175_020 Hb_000152_820--Hb_010175_020 Hb_000152_820--Hb_000317_020 Hb_000152_820--Hb_007757_110 Hb_001736_040 Hb_001736_040 Hb_000152_820--Hb_001736_040 Hb_000776_110 Hb_000776_110 Hb_000152_820--Hb_000776_110 Hb_001269_550 Hb_001269_550 Hb_000152_820--Hb_001269_550 Hb_004600_040 Hb_004600_040 Hb_000538_200--Hb_004600_040 Hb_001157_060 Hb_001157_060 Hb_000538_200--Hb_001157_060 Hb_000815_210 Hb_000815_210 Hb_000538_200--Hb_000815_210 Hb_000538_200--Hb_001736_040 Hb_011673_030 Hb_011673_030 Hb_000538_200--Hb_011673_030 Hb_000421_260 Hb_000421_260 Hb_000538_200--Hb_000421_260 Hb_007108_030 Hb_007108_030 Hb_002150_030--Hb_007108_030 Hb_002150_030--Hb_007586_030 Hb_000977_180 Hb_000977_180 Hb_002150_030--Hb_000977_180 Hb_001797_050 Hb_001797_050 Hb_002150_030--Hb_001797_050 Hb_006649_060 Hb_006649_060 Hb_002150_030--Hb_006649_060 Hb_009411_010 Hb_009411_010 Hb_002150_030--Hb_009411_010 Hb_000317_020--Hb_001736_040 Hb_002876_110 Hb_002876_110 Hb_000317_020--Hb_002876_110 Hb_001975_160 Hb_001975_160 Hb_000317_020--Hb_001975_160 Hb_000661_050 Hb_000661_050 Hb_000317_020--Hb_000661_050 Hb_000317_020--Hb_004600_040 Hb_000005_380 Hb_000005_380 Hb_007586_030--Hb_000005_380 Hb_000244_250 Hb_000244_250 Hb_007586_030--Hb_000244_250 Hb_007586_030--Hb_000977_180 Hb_007586_030--Hb_006649_060 Hb_123777_030 Hb_123777_030 Hb_007586_030--Hb_123777_030 Hb_007757_110--Hb_010175_020 Hb_002307_100 Hb_002307_100 Hb_007757_110--Hb_002307_100 Hb_001584_150 Hb_001584_150 Hb_007757_110--Hb_001584_150 Hb_175338_030 Hb_175338_030 Hb_007757_110--Hb_175338_030 Hb_000390_070 Hb_000390_070 Hb_007757_110--Hb_000390_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
83.4022 63.2451 18.5554 36.2174 172.524 146.338
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
69.1841 81.8268 152.83 59.8373 59.0562

CAGE analysis