Hb_000731_020

Information

Type transcription factor
Description TF Family: C2H2
Location Contig731: 17906-18646
Sequence    

Annotation

kegg
ID pop:POPTR_0001s30260g
description POPTRDRAFT_1069712; hypothetical protein
nr
ID XP_012093108.1
description PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
swissprot
ID Q96289
description Zinc finger protein ZAT10 OS=Arabidopsis thaliana GN=ZAT10 PE=2 SV=1
trembl
ID A0A067L7T6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16315 PE=4 SV=1
Gene Ontology
ID GO:0046872
description zinc finger protein zat10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55969: 17955-18873
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000731_020 0.0 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
2 Hb_000221_280 0.0623454219 - - PREDICTED: protein EXORDIUM-like [Populus euphratica]
3 Hb_019978_010 0.0827070027 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
4 Hb_000313_190 0.0881441771 - - PREDICTED: uncharacterized protein LOC105636896 [Jatropha curcas]
5 Hb_006916_220 0.0982568896 - - hypothetical protein JCGZ_20099 [Jatropha curcas]
6 Hb_004724_310 0.0986441264 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
7 Hb_003071_040 0.0988263822 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
8 Hb_184752_010 0.1008356239 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
9 Hb_000529_050 0.1039039196 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
10 Hb_004724_290 0.1043794781 transcription factor TF Family: NAC -
11 Hb_001213_140 0.1096122381 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
12 Hb_002006_110 0.1111256575 transcription factor TF Family: LFY LEAFY-like protein [Pistacia chinensis]
13 Hb_010136_020 0.1125251682 - - stress-induced receptor-like kinase [Medicago truncatula]
14 Hb_036754_040 0.1147308571 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
15 Hb_000827_090 0.1150160274 - - PREDICTED: uncharacterized protein LOC103714121 [Phoenix dactylifera]
16 Hb_000028_360 0.1159775447 - - ubiquitin-protein ligase, putative [Ricinus communis]
17 Hb_000925_110 0.1176020484 - - Spotted leaf protein, putative [Ricinus communis]
18 Hb_013591_010 0.1197916642 - - Mitogen-activated protein kinase kinase kinase 1 [Glycine soja]
19 Hb_002422_020 0.1223046207 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
20 Hb_041534_010 0.1224355821 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]

Gene co-expression network

sample Hb_000731_020 Hb_000731_020 Hb_000221_280 Hb_000221_280 Hb_000731_020--Hb_000221_280 Hb_019978_010 Hb_019978_010 Hb_000731_020--Hb_019978_010 Hb_000313_190 Hb_000313_190 Hb_000731_020--Hb_000313_190 Hb_006916_220 Hb_006916_220 Hb_000731_020--Hb_006916_220 Hb_004724_310 Hb_004724_310 Hb_000731_020--Hb_004724_310 Hb_003071_040 Hb_003071_040 Hb_000731_020--Hb_003071_040 Hb_000529_050 Hb_000529_050 Hb_000221_280--Hb_000529_050 Hb_000221_280--Hb_000313_190 Hb_001213_140 Hb_001213_140 Hb_000221_280--Hb_001213_140 Hb_029622_080 Hb_029622_080 Hb_000221_280--Hb_029622_080 Hb_000221_280--Hb_003071_040 Hb_002006_110 Hb_002006_110 Hb_019978_010--Hb_002006_110 Hb_004724_290 Hb_004724_290 Hb_019978_010--Hb_004724_290 Hb_010136_020 Hb_010136_020 Hb_019978_010--Hb_010136_020 Hb_036754_040 Hb_036754_040 Hb_019978_010--Hb_036754_040 Hb_184752_010 Hb_184752_010 Hb_019978_010--Hb_184752_010 Hb_019978_010--Hb_006916_220 Hb_000313_190--Hb_000529_050 Hb_001477_080 Hb_001477_080 Hb_000313_190--Hb_001477_080 Hb_000313_190--Hb_003071_040 Hb_004242_160 Hb_004242_160 Hb_000313_190--Hb_004242_160 Hb_006916_220--Hb_004724_290 Hb_006916_220--Hb_004724_310 Hb_006916_220--Hb_002006_110 Hb_006916_220--Hb_010136_020 Hb_006916_220--Hb_184752_010 Hb_000996_100 Hb_000996_100 Hb_004724_310--Hb_000996_100 Hb_008963_010 Hb_008963_010 Hb_004724_310--Hb_008963_010 Hb_000925_110 Hb_000925_110 Hb_004724_310--Hb_000925_110 Hb_000714_080 Hb_000714_080 Hb_004724_310--Hb_000714_080 Hb_001098_020 Hb_001098_020 Hb_003071_040--Hb_001098_020 Hb_098175_010 Hb_098175_010 Hb_003071_040--Hb_098175_010 Hb_010573_030 Hb_010573_030 Hb_003071_040--Hb_010573_030 Hb_003071_040--Hb_000529_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.367723 338.772 106.726 161.441 1.42849 0.397796
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.972487 1.64679 0.211191 2.9364 4.09868

CAGE analysis