Hb_000732_010

Information

Type -
Description -
Location Contig732: 2323-6305
Sequence    

Annotation

kegg
ID pxb:103961749
description nitric oxide synthase-interacting protein
nr
ID XP_009372652.1
description PREDICTED: nitric oxide synthase-interacting protein [Pyrus x bretschneideri]
swissprot
ID Q6NUH3
description Nitric oxide synthase-interacting protein OS=Xenopus laevis GN=nosip PE=2 SV=1
trembl
ID A0A067JLH3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21331 PE=4 SV=1
Gene Ontology
ID GO:0008270
description nitric oxide synthase-interacting

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56108: 4191-6286 , PASA_asmbl_56109: 4550-4658
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000732_010 0.0 - - PREDICTED: nitric oxide synthase-interacting protein [Pyrus x bretschneideri]
2 Hb_002232_410 0.0592011221 - - PREDICTED: L-galactose dehydrogenase [Jatropha curcas]
3 Hb_065525_040 0.060584805 transcription factor TF Family: ERF ethylene-responsive transcription factor 3-like [Jatropha curcas]
4 Hb_000331_550 0.0646079012 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 67 [Jatropha curcas]
5 Hb_002205_110 0.0649724699 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000708_030 0.0668307548 - - PREDICTED: uncharacterized protein LOC105650742 [Jatropha curcas]
7 Hb_001205_240 0.0669394458 - - PREDICTED: uncharacterized protein LOC105645528 [Jatropha curcas]
8 Hb_001369_730 0.0677840837 - - F5O11.10, putative isoform 1 [Theobroma cacao]
9 Hb_000915_180 0.0682742714 - - PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit-like [Pyrus x bretschneideri]
10 Hb_000868_090 0.0686189049 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 4 [Jatropha curcas]
11 Hb_000318_250 0.0690409786 - - PREDICTED: uncharacterized protein LOC105634251 [Jatropha curcas]
12 Hb_000069_310 0.0693337372 - - ubiquitin ligase [Cucumis melo subsp. melo]
13 Hb_005116_160 0.0695006483 transcription factor TF Family: TRAF -
14 Hb_003680_120 0.0702919274 - - PREDICTED: E3 ubiquitin-protein ligase UPL7 [Jatropha curcas]
15 Hb_000327_270 0.0706629489 - - PREDICTED: leukocyte receptor cluster member 8 homolog isoform X1 [Jatropha curcas]
16 Hb_000331_680 0.0719932106 - - Protein bem46, putative [Ricinus communis]
17 Hb_000028_370 0.0722572989 - - Guanine nucleotide-binding protein alpha-2 subunit [Glycine soja]
18 Hb_000699_030 0.0741381671 - - PREDICTED: serine/threonine-protein phosphatase PP1-like isoform X2 [Jatropha curcas]
19 Hb_000930_030 0.0741547716 - - PREDICTED: uncharacterized protein LOC105629651 [Jatropha curcas]
20 Hb_005271_220 0.0745110404 - - PREDICTED: general transcription factor IIE subunit 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_000732_010 Hb_000732_010 Hb_002232_410 Hb_002232_410 Hb_000732_010--Hb_002232_410 Hb_065525_040 Hb_065525_040 Hb_000732_010--Hb_065525_040 Hb_000331_550 Hb_000331_550 Hb_000732_010--Hb_000331_550 Hb_002205_110 Hb_002205_110 Hb_000732_010--Hb_002205_110 Hb_000708_030 Hb_000708_030 Hb_000732_010--Hb_000708_030 Hb_001205_240 Hb_001205_240 Hb_000732_010--Hb_001205_240 Hb_008725_230 Hb_008725_230 Hb_002232_410--Hb_008725_230 Hb_000030_030 Hb_000030_030 Hb_002232_410--Hb_000030_030 Hb_002232_410--Hb_002205_110 Hb_005271_220 Hb_005271_220 Hb_002232_410--Hb_005271_220 Hb_000028_370 Hb_000028_370 Hb_002232_410--Hb_000028_370 Hb_002754_010 Hb_002754_010 Hb_065525_040--Hb_002754_010 Hb_005054_110 Hb_005054_110 Hb_065525_040--Hb_005054_110 Hb_065525_040--Hb_000331_550 Hb_005463_100 Hb_005463_100 Hb_065525_040--Hb_005463_100 Hb_000069_310 Hb_000069_310 Hb_065525_040--Hb_000069_310 Hb_001163_050 Hb_001163_050 Hb_000331_550--Hb_001163_050 Hb_000373_070 Hb_000373_070 Hb_000331_550--Hb_000373_070 Hb_156279_020 Hb_156279_020 Hb_000331_550--Hb_156279_020 Hb_011995_010 Hb_011995_010 Hb_000331_550--Hb_011995_010 Hb_015934_040 Hb_015934_040 Hb_000331_550--Hb_015934_040 Hb_000331_550--Hb_002754_010 Hb_002205_110--Hb_000028_370 Hb_002205_110--Hb_001205_240 Hb_001408_040 Hb_001408_040 Hb_002205_110--Hb_001408_040 Hb_010997_080 Hb_010997_080 Hb_002205_110--Hb_010997_080 Hb_000441_140 Hb_000441_140 Hb_002205_110--Hb_000441_140 Hb_006831_140 Hb_006831_140 Hb_000708_030--Hb_006831_140 Hb_003680_120 Hb_003680_120 Hb_000708_030--Hb_003680_120 Hb_000699_030 Hb_000699_030 Hb_000708_030--Hb_000699_030 Hb_000327_270 Hb_000327_270 Hb_000708_030--Hb_000327_270 Hb_005730_040 Hb_005730_040 Hb_000708_030--Hb_005730_040 Hb_093458_040 Hb_093458_040 Hb_000708_030--Hb_093458_040 Hb_001205_240--Hb_000028_370 Hb_003761_010 Hb_003761_010 Hb_001205_240--Hb_003761_010 Hb_001205_240--Hb_008725_230 Hb_000710_060 Hb_000710_060 Hb_001205_240--Hb_000710_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.0755 18.5038 12.5409 17.5337 15.5835 14.6921
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.4003 17.4852 17.846 13.2545 14.4357

CAGE analysis