Hb_000732_020

Information

Type -
Description -
Location Contig732: 2600-3319
Sequence    

Annotation

kegg
ID rcu:RCOM_1096880
description hypothetical protein
nr
ID XP_012091460.1
description PREDICTED: universal stress protein A-like protein [Jatropha curcas]
swissprot
ID P87132
description Uncharacterized protein C167.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC167.05 PE=1 SV=2
trembl
ID A0A067JMW6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21330 PE=4 SV=1
Gene Ontology
ID GO:0005634
description adenine nucleotide alpha hydrolases-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56107: 2597-3410
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000732_020 0.0 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]
2 Hb_002955_010 0.0773389958 - - PREDICTED: Werner syndrome ATP-dependent helicase homolog [Jatropha curcas]
3 Hb_113216_010 0.0846950762 - - PREDICTED: calcium-dependent protein kinase 26-like [Jatropha curcas]
4 Hb_001582_030 0.0850755155 - - PREDICTED: uncharacterized protein LOC105639462 [Jatropha curcas]
5 Hb_002986_050 0.0867435071 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0234100-like [Jatropha curcas]
6 Hb_000322_170 0.0872884168 - - PREDICTED: nucleosome assembly protein 1;3 [Jatropha curcas]
7 Hb_000270_450 0.0881071679 - - PREDICTED: uncharacterized protein LOC105167687 [Sesamum indicum]
8 Hb_005000_270 0.0893105594 - - unnamed protein product [Vitis vinifera]
9 Hb_000165_130 0.0899250615 - - PREDICTED: uncharacterized protein At5g39865-like [Jatropha curcas]
10 Hb_007534_040 0.0902719614 - - PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]
11 Hb_000212_280 0.0925837865 - - PREDICTED: putative RNA-binding protein Luc7-like 2 [Gossypium raimondii]
12 Hb_001969_040 0.0935417237 - - PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
13 Hb_009615_110 0.0951596508 - - PREDICTED: PAX3- and PAX7-binding protein 1 [Jatropha curcas]
14 Hb_000814_090 0.0958209066 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000237_230 0.0983861852 - - PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 isoform X1 [Jatropha curcas]
16 Hb_004032_350 0.1005737737 - - PREDICTED: splicing factor U2af small subunit B-like isoform X1 [Musa acuminata subsp. malaccensis]
17 Hb_001498_030 0.1021388526 - - PREDICTED: eukaryotic translation initiation factor 3 subunit E [Populus euphratica]
18 Hb_000318_140 0.1028158816 - - Kinase superfamily protein isoform 2 [Theobroma cacao]
19 Hb_010298_020 0.1035193196 - - PREDICTED: uncharacterized protein At2g02148 isoform X4 [Vitis vinifera]
20 Hb_000640_210 0.1038081195 - - hypothetical protein JCGZ_14045 [Jatropha curcas]

Gene co-expression network

sample Hb_000732_020 Hb_000732_020 Hb_002955_010 Hb_002955_010 Hb_000732_020--Hb_002955_010 Hb_113216_010 Hb_113216_010 Hb_000732_020--Hb_113216_010 Hb_001582_030 Hb_001582_030 Hb_000732_020--Hb_001582_030 Hb_002986_050 Hb_002986_050 Hb_000732_020--Hb_002986_050 Hb_000322_170 Hb_000322_170 Hb_000732_020--Hb_000322_170 Hb_000270_450 Hb_000270_450 Hb_000732_020--Hb_000270_450 Hb_000256_270 Hb_000256_270 Hb_002955_010--Hb_000256_270 Hb_009615_110 Hb_009615_110 Hb_002955_010--Hb_009615_110 Hb_000372_040 Hb_000372_040 Hb_002955_010--Hb_000372_040 Hb_000684_180 Hb_000684_180 Hb_002955_010--Hb_000684_180 Hb_002955_010--Hb_002986_050 Hb_000212_280 Hb_000212_280 Hb_113216_010--Hb_000212_280 Hb_000016_180 Hb_000016_180 Hb_113216_010--Hb_000016_180 Hb_002837_070 Hb_002837_070 Hb_113216_010--Hb_002837_070 Hb_000185_090 Hb_000185_090 Hb_113216_010--Hb_000185_090 Hb_025048_040 Hb_025048_040 Hb_113216_010--Hb_025048_040 Hb_174865_050 Hb_174865_050 Hb_113216_010--Hb_174865_050 Hb_005000_270 Hb_005000_270 Hb_001582_030--Hb_005000_270 Hb_001582_030--Hb_000212_280 Hb_000134_360 Hb_000134_360 Hb_001582_030--Hb_000134_360 Hb_019871_020 Hb_019871_020 Hb_001582_030--Hb_019871_020 Hb_008528_010 Hb_008528_010 Hb_001582_030--Hb_008528_010 Hb_002475_050 Hb_002475_050 Hb_002986_050--Hb_002475_050 Hb_002986_050--Hb_000212_280 Hb_002986_050--Hb_000372_040 Hb_002986_050--Hb_005000_270 Hb_003216_110 Hb_003216_110 Hb_002986_050--Hb_003216_110 Hb_001178_060 Hb_001178_060 Hb_000322_170--Hb_001178_060 Hb_000640_210 Hb_000640_210 Hb_000322_170--Hb_000640_210 Hb_005016_030 Hb_005016_030 Hb_000322_170--Hb_005016_030 Hb_004032_350 Hb_004032_350 Hb_000322_170--Hb_004032_350 Hb_000076_290 Hb_000076_290 Hb_000322_170--Hb_000076_290 Hb_000174_200 Hb_000174_200 Hb_000322_170--Hb_000174_200 Hb_001009_050 Hb_001009_050 Hb_000270_450--Hb_001009_050 Hb_001140_080 Hb_001140_080 Hb_000270_450--Hb_001140_080 Hb_000270_450--Hb_025048_040 Hb_000270_450--Hb_009615_110 Hb_000270_450--Hb_005016_030 Hb_000320_440 Hb_000320_440 Hb_000270_450--Hb_000320_440
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
94.5592 37.2259 9.72894 21.5852 95.9867 132.7
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
49.1764 31.3817 26.1696 16.134 5.94855

CAGE analysis