Hb_000732_070

Information

Type -
Description -
Location Contig732: 90816-93410
Sequence    

Annotation

kegg
ID pop:POPTR_0011s04040g
description POPTRDRAFT_889063; hypothetical protein
nr
ID XP_012091465.1
description PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
swissprot
ID Q9LVT4
description Probable disease resistance protein At5g47250 OS=Arabidopsis thaliana GN=At5g47250 PE=2 SV=1
trembl
ID A0A067JMW9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21335 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000732_070 0.0 - - PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
2 Hb_020805_100 0.0816371544 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1b [Jatropha curcas]
3 Hb_000086_050 0.092705343 - - PREDICTED: structural maintenance of chromosomes protein 1 [Jatropha curcas]
4 Hb_003895_020 0.0933015306 - - PREDICTED: dedicator of cytokinesis protein 7 isoform X2 [Jatropha curcas]
5 Hb_002400_230 0.096554889 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Jatropha curcas]
6 Hb_000334_130 0.1062609281 - - hypothetical protein JCGZ_16781 [Jatropha curcas]
7 Hb_006573_160 0.1131122123 - - PREDICTED: dnaJ protein ERDJ2A-like [Jatropha curcas]
8 Hb_005539_040 0.1141109835 - - PREDICTED: RNA-binding protein 25 isoform X3 [Jatropha curcas]
9 Hb_000300_250 0.114398204 - - polyribonucleotide nucleotidyltransferase, putative [Ricinus communis]
10 Hb_001454_220 0.1145871449 - - PREDICTED: ubiquitin-like-specific protease ESD4 [Jatropha curcas]
11 Hb_000997_150 0.1176030655 - - ankyrin repeat-containing protein, putative [Ricinus communis]
12 Hb_006615_030 0.1178048863 - - prolyl oligopeptidase family protein [Populus trichocarpa]
13 Hb_009449_090 0.1178061084 - - PREDICTED: RNA-binding protein 25 isoform X1 [Jatropha curcas]
14 Hb_007283_030 0.1186667489 - - PREDICTED: pre-mRNA-processing protein 40C-like [Malus domestica]
15 Hb_005181_040 0.118961215 - - PREDICTED: MAP kinase kinase MKK1/SSP32-like [Jatropha curcas]
16 Hb_003992_180 0.1192244756 - - PREDICTED: methyl-CpG-binding domain-containing protein 11 isoform X1 [Jatropha curcas]
17 Hb_000345_490 0.1192629225 - - PREDICTED: mitochondrial Rho GTPase 1-like [Jatropha curcas]
18 Hb_001221_090 0.1204510513 - - PREDICTED: uncharacterized protein LOC105640211 isoform X1 [Jatropha curcas]
19 Hb_000805_200 0.1209439746 - - PREDICTED: telomere repeat-binding protein 2 isoform X2 [Jatropha curcas]
20 Hb_012305_140 0.1214303332 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000732_070 Hb_000732_070 Hb_020805_100 Hb_020805_100 Hb_000732_070--Hb_020805_100 Hb_000086_050 Hb_000086_050 Hb_000732_070--Hb_000086_050 Hb_003895_020 Hb_003895_020 Hb_000732_070--Hb_003895_020 Hb_002400_230 Hb_002400_230 Hb_000732_070--Hb_002400_230 Hb_000334_130 Hb_000334_130 Hb_000732_070--Hb_000334_130 Hb_006573_160 Hb_006573_160 Hb_000732_070--Hb_006573_160 Hb_000671_060 Hb_000671_060 Hb_020805_100--Hb_000671_060 Hb_020805_100--Hb_003895_020 Hb_003001_040 Hb_003001_040 Hb_020805_100--Hb_003001_040 Hb_006022_010 Hb_006022_010 Hb_020805_100--Hb_006022_010 Hb_152910_010 Hb_152910_010 Hb_020805_100--Hb_152910_010 Hb_009449_090 Hb_009449_090 Hb_000086_050--Hb_009449_090 Hb_007283_030 Hb_007283_030 Hb_000086_050--Hb_007283_030 Hb_007576_220 Hb_007576_220 Hb_000086_050--Hb_007576_220 Hb_002687_090 Hb_002687_090 Hb_000086_050--Hb_002687_090 Hb_007576_230 Hb_007576_230 Hb_000086_050--Hb_007576_230 Hb_155159_010 Hb_155159_010 Hb_000086_050--Hb_155159_010 Hb_000866_080 Hb_000866_080 Hb_003895_020--Hb_000866_080 Hb_004324_060 Hb_004324_060 Hb_003895_020--Hb_004324_060 Hb_001221_090 Hb_001221_090 Hb_003895_020--Hb_001221_090 Hb_030545_030 Hb_030545_030 Hb_003895_020--Hb_030545_030 Hb_002903_140 Hb_002903_140 Hb_003895_020--Hb_002903_140 Hb_003895_020--Hb_155159_010 Hb_001454_170 Hb_001454_170 Hb_002400_230--Hb_001454_170 Hb_002400_230--Hb_000334_130 Hb_001454_220 Hb_001454_220 Hb_002400_230--Hb_001454_220 Hb_152540_010 Hb_152540_010 Hb_002400_230--Hb_152540_010 Hb_004032_230 Hb_004032_230 Hb_002400_230--Hb_004032_230 Hb_000334_130--Hb_001221_090 Hb_002092_070 Hb_002092_070 Hb_000334_130--Hb_002092_070 Hb_002027_280 Hb_002027_280 Hb_000334_130--Hb_002027_280 Hb_000334_130--Hb_001454_170 Hb_004429_010 Hb_004429_010 Hb_000334_130--Hb_004429_010 Hb_000352_070 Hb_000352_070 Hb_000334_130--Hb_000352_070 Hb_001153_050 Hb_001153_050 Hb_006573_160--Hb_001153_050 Hb_011972_020 Hb_011972_020 Hb_006573_160--Hb_011972_020 Hb_002814_110 Hb_002814_110 Hb_006573_160--Hb_002814_110 Hb_098209_010 Hb_098209_010 Hb_006573_160--Hb_098209_010 Hb_000302_170 Hb_000302_170 Hb_006573_160--Hb_000302_170 Hb_000102_050 Hb_000102_050 Hb_006573_160--Hb_000102_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.32165 7.44974 6.06054 3.20325 4.71471 2.70825
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.695706 0.89461 0.789692 2.12565 4.20402

CAGE analysis