Hb_000732_110

Information

Type -
Description -
Location Contig732: 114705-117728
Sequence    

Annotation

kegg
ID rcu:RCOM_1096470
description nucleoside transporter, putative
nr
ID KDP20868.1
description hypothetical protein JCGZ_21339 [Jatropha curcas]
swissprot
ID Q9M0Y3
description Equilibrative nucleotide transporter 3 OS=Arabidopsis thaliana GN=ENT3 PE=1 SV=1
trembl
ID A0A067JDN0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21339 PE=4 SV=1
Gene Ontology
ID GO:0016021
description equilibrative nucleotide transporter 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000732_110 0.0 - - hypothetical protein JCGZ_21339 [Jatropha curcas]
2 Hb_011609_130 0.1369991791 - - -
3 Hb_002639_170 0.2040426097 - - carboxy-lyase, putative [Ricinus communis]
4 Hb_000926_030 0.2119906982 - - zinc finger protein, putative [Ricinus communis]
5 Hb_000128_030 0.2154154148 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001241_020 0.2157946558 - - PREDICTED: uncharacterized protein LOC105628311 [Jatropha curcas]
7 Hb_000261_530 0.225370487 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
8 Hb_002799_120 0.2465221311 - - PREDICTED: uncharacterized protein LOC105141197 [Populus euphratica]
9 Hb_000465_030 0.2500215162 - - PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
10 Hb_000668_100 0.2505156985 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
11 Hb_000028_010 0.251402066 - - cytochrome P450, putative [Ricinus communis]
12 Hb_005375_100 0.2545280163 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]
13 Hb_005162_120 0.2548067612 - - ferric reductase oxidase [Manihot esculenta]
14 Hb_000173_330 0.2559815095 - - PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Vitis vinifera]
15 Hb_007317_100 0.2586619863 - - Peflin, putative [Ricinus communis]
16 Hb_006649_100 0.2661262676 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
17 Hb_000853_340 0.2672824184 - - PREDICTED: kynurenine--oxoglutarate transaminase 1-like isoform X2 [Populus euphratica]
18 Hb_019762_030 0.2692051664 - - hypothetical protein POPTR_0002s08720g [Populus trichocarpa]
19 Hb_155874_020 0.2695329202 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
20 Hb_003702_010 0.2700439777 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000732_110 Hb_000732_110 Hb_011609_130 Hb_011609_130 Hb_000732_110--Hb_011609_130 Hb_002639_170 Hb_002639_170 Hb_000732_110--Hb_002639_170 Hb_000926_030 Hb_000926_030 Hb_000732_110--Hb_000926_030 Hb_000128_030 Hb_000128_030 Hb_000732_110--Hb_000128_030 Hb_001241_020 Hb_001241_020 Hb_000732_110--Hb_001241_020 Hb_000261_530 Hb_000261_530 Hb_000732_110--Hb_000261_530 Hb_011609_130--Hb_001241_020 Hb_005162_120 Hb_005162_120 Hb_011609_130--Hb_005162_120 Hb_011609_130--Hb_002639_170 Hb_000028_010 Hb_000028_010 Hb_011609_130--Hb_000028_010 Hb_002799_120 Hb_002799_120 Hb_011609_130--Hb_002799_120 Hb_002639_170--Hb_005162_120 Hb_002639_170--Hb_000261_530 Hb_010288_050 Hb_010288_050 Hb_002639_170--Hb_010288_050 Hb_002639_170--Hb_001241_020 Hb_007317_100 Hb_007317_100 Hb_002639_170--Hb_007317_100 Hb_000926_030--Hb_000128_030 Hb_024494_010 Hb_024494_010 Hb_000926_030--Hb_024494_010 Hb_000961_060 Hb_000961_060 Hb_000926_030--Hb_000961_060 Hb_004096_230 Hb_004096_230 Hb_000926_030--Hb_004096_230 Hb_000926_030--Hb_011609_130 Hb_008221_190 Hb_008221_190 Hb_000926_030--Hb_008221_190 Hb_000062_210 Hb_000062_210 Hb_000128_030--Hb_000062_210 Hb_030627_010 Hb_030627_010 Hb_000128_030--Hb_030627_010 Hb_000128_030--Hb_004096_230 Hb_000184_010 Hb_000184_010 Hb_000128_030--Hb_000184_010 Hb_000243_180 Hb_000243_180 Hb_001241_020--Hb_000243_180 Hb_001926_010 Hb_001926_010 Hb_001241_020--Hb_001926_010 Hb_006909_050 Hb_006909_050 Hb_001241_020--Hb_006909_050 Hb_000731_030 Hb_000731_030 Hb_001241_020--Hb_000731_030 Hb_001241_020--Hb_000028_010 Hb_000261_530--Hb_010288_050 Hb_006788_090 Hb_006788_090 Hb_000261_530--Hb_006788_090 Hb_000261_530--Hb_005162_120 Hb_000261_530--Hb_011609_130 Hb_000261_530--Hb_002799_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.21265 0.0957448 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.245051 0 0 0.25405

CAGE analysis