Hb_000732_130

Information

Type transcription factor
Description TF Family: HSF
Location Contig732: 132452-138998
Sequence    

Annotation

kegg
ID rcu:RCOM_1278140
description Heat shock factor protein HSF8, putative
nr
ID KDP30379.1
description hypothetical protein JCGZ_17108 [Jatropha curcas]
swissprot
ID Q40152
description Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1
trembl
ID A0A067KEU2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17108 PE=3 SV=1
Gene Ontology
ID GO:0005634
description heat shock factor protein hsf8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56122: 132330-132759 , PASA_asmbl_56123: 133248-133672
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000732_130 0.0 transcription factor TF Family: HSF hypothetical protein JCGZ_17108 [Jatropha curcas]
2 Hb_011214_020 0.0526682467 - - PREDICTED: RNA-binding protein 5 isoform X1 [Jatropha curcas]
3 Hb_000251_130 0.0839266071 - - PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 [Jatropha curcas]
4 Hb_000384_100 0.0876715112 - - hydrolase, putative [Ricinus communis]
5 Hb_008221_140 0.0879508284 - - PREDICTED: uncharacterized protein LOC105644226 [Jatropha curcas]
6 Hb_002878_020 0.0882366118 - - mitochondrial carrier protein, putative [Ricinus communis]
7 Hb_004306_100 0.0889945051 - - PREDICTED: uncharacterized protein LOC105644390 [Jatropha curcas]
8 Hb_004586_340 0.0918919142 - - PREDICTED: serine/threonine-protein kinase PEPKR2 [Jatropha curcas]
9 Hb_005463_040 0.0926743777 - - signal transducer, putative [Ricinus communis]
10 Hb_001699_130 0.0938336608 transcription factor TF Family: CSD PREDICTED: cold shock domain-containing protein 3 [Jatropha curcas]
11 Hb_000107_160 0.0954676104 - - PREDICTED: uncharacterized protein LOC105645584 [Jatropha curcas]
12 Hb_011173_050 0.0970462569 - - PREDICTED: OTU domain-containing protein DDB_G0284757 [Jatropha curcas]
13 Hb_002256_020 0.0984596409 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001828_060 0.0987949315 desease resistance Gene Name: AAA_31 nucleotide-binding protein, putative [Ricinus communis]
15 Hb_007416_320 0.0997031225 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004586_170 0.1000209653 - - hypothetical protein PRUPE_ppa011196mg [Prunus persica]
17 Hb_004994_140 0.1005661378 - - PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic [Jatropha curcas]
18 Hb_006031_020 0.1007881079 - - PREDICTED: protein FLX-like 1 isoform X1 [Jatropha curcas]
19 Hb_000723_080 0.1008840623 - - PREDICTED: transcription initiation factor TFIID subunit 8 [Jatropha curcas]
20 Hb_000062_220 0.1011557595 - - BnaC02g35870D [Brassica napus]

Gene co-expression network

sample Hb_000732_130 Hb_000732_130 Hb_011214_020 Hb_011214_020 Hb_000732_130--Hb_011214_020 Hb_000251_130 Hb_000251_130 Hb_000732_130--Hb_000251_130 Hb_000384_100 Hb_000384_100 Hb_000732_130--Hb_000384_100 Hb_008221_140 Hb_008221_140 Hb_000732_130--Hb_008221_140 Hb_002878_020 Hb_002878_020 Hb_000732_130--Hb_002878_020 Hb_004306_100 Hb_004306_100 Hb_000732_130--Hb_004306_100 Hb_007416_320 Hb_007416_320 Hb_011214_020--Hb_007416_320 Hb_011214_020--Hb_002878_020 Hb_001545_170 Hb_001545_170 Hb_011214_020--Hb_001545_170 Hb_011173_050 Hb_011173_050 Hb_011214_020--Hb_011173_050 Hb_005463_040 Hb_005463_040 Hb_011214_020--Hb_005463_040 Hb_001226_160 Hb_001226_160 Hb_000251_130--Hb_001226_160 Hb_000656_400 Hb_000656_400 Hb_000251_130--Hb_000656_400 Hb_002183_090 Hb_002183_090 Hb_000251_130--Hb_002183_090 Hb_005357_030 Hb_005357_030 Hb_000251_130--Hb_005357_030 Hb_172632_090 Hb_172632_090 Hb_000251_130--Hb_172632_090 Hb_019253_020 Hb_019253_020 Hb_000251_130--Hb_019253_020 Hb_000479_090 Hb_000479_090 Hb_000384_100--Hb_000479_090 Hb_000059_370 Hb_000059_370 Hb_000384_100--Hb_000059_370 Hb_010068_020 Hb_010068_020 Hb_000384_100--Hb_010068_020 Hb_000384_100--Hb_002183_090 Hb_000230_510 Hb_000230_510 Hb_000384_100--Hb_000230_510 Hb_000920_110 Hb_000920_110 Hb_000384_100--Hb_000920_110 Hb_008221_140--Hb_005463_040 Hb_000676_180 Hb_000676_180 Hb_008221_140--Hb_000676_180 Hb_008221_140--Hb_002183_090 Hb_001226_040 Hb_001226_040 Hb_008221_140--Hb_001226_040 Hb_000167_140 Hb_000167_140 Hb_008221_140--Hb_000167_140 Hb_000085_050 Hb_000085_050 Hb_008221_140--Hb_000085_050 Hb_000250_060 Hb_000250_060 Hb_002878_020--Hb_000250_060 Hb_009803_050 Hb_009803_050 Hb_002878_020--Hb_009803_050 Hb_086639_030 Hb_086639_030 Hb_002878_020--Hb_086639_030 Hb_001959_190 Hb_001959_190 Hb_002878_020--Hb_001959_190 Hb_001633_210 Hb_001633_210 Hb_002878_020--Hb_001633_210 Hb_002256_020 Hb_002256_020 Hb_004306_100--Hb_002256_020 Hb_004586_170 Hb_004586_170 Hb_004306_100--Hb_004586_170 Hb_004324_370 Hb_004324_370 Hb_004306_100--Hb_004324_370 Hb_000723_080 Hb_000723_080 Hb_004306_100--Hb_000723_080 Hb_001699_130 Hb_001699_130 Hb_004306_100--Hb_001699_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.37235 7.81142 2.8079 3.73467 7.50106 7.27137
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.3092 18.7838 12.018 6.88222 6.99933

CAGE analysis