Hb_000732_300

Information

Type -
Description -
Location Contig732: 297147-306709
Sequence    

Annotation

kegg
ID pop:POPTR_0004s03510g
description hypothetical protein
nr
ID XP_012091499.1
description PREDICTED: uncharacterized protein LOC105649465 isoform X2 [Jatropha curcas]
swissprot
ID Q9FKL6
description Calmodulin-binding protein 60 B OS=Arabidopsis thaliana GN=CBP60B PE=2 SV=1
trembl
ID A0A067JLK1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21361 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56140: 297609-297748
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000732_300 0.0 - - PREDICTED: uncharacterized protein LOC105649465 isoform X2 [Jatropha curcas]
2 Hb_003654_020 0.0915188985 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
3 Hb_004117_380 0.0932073189 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 14 [Jatropha curcas]
4 Hb_003209_150 0.1048258243 - - CLE9, putative [Ricinus communis]
5 Hb_002284_160 0.1066237934 - - glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus communis]
6 Hb_000413_190 0.1079491207 - - PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Pyrus x bretschneideri]
7 Hb_005890_010 0.1106265423 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
8 Hb_001677_170 0.1118738632 - - hypothetical protein M569_03661, partial [Genlisea aurea]
9 Hb_060534_010 0.1144866668 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
10 Hb_000343_050 0.115021615 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001369_340 0.1153869922 - - Peroxisomal membrane protein 11B [Theobroma cacao]
12 Hb_001115_070 0.1177553752 - - RecName: Full=CASP-like protein 2C1; Short=PtCASPL2C1 [Populus trichocarpa]
13 Hb_004017_030 0.1189136519 - - PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
14 Hb_003767_060 0.1213988111 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
15 Hb_000186_180 0.1229112003 - - PREDICTED: uncharacterized protein LOC105649287 [Jatropha curcas]
16 Hb_002818_160 0.1305776774 - - PREDICTED: uncharacterized protein LOC105642722 [Jatropha curcas]
17 Hb_000116_160 0.1326919885 transcription factor TF Family: RWP-RK hypothetical protein JCGZ_22391 [Jatropha curcas]
18 Hb_127629_010 0.1338718344 - - hypothetical protein CICLE_v10005216mg [Citrus clementina]
19 Hb_000025_700 0.1341933002 - - PREDICTED: serine--glyoxylate aminotransferase [Nelumbo nucifera]
20 Hb_001777_030 0.1347445588 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]

Gene co-expression network

sample Hb_000732_300 Hb_000732_300 Hb_003654_020 Hb_003654_020 Hb_000732_300--Hb_003654_020 Hb_004117_380 Hb_004117_380 Hb_000732_300--Hb_004117_380 Hb_003209_150 Hb_003209_150 Hb_000732_300--Hb_003209_150 Hb_002284_160 Hb_002284_160 Hb_000732_300--Hb_002284_160 Hb_000413_190 Hb_000413_190 Hb_000732_300--Hb_000413_190 Hb_005890_010 Hb_005890_010 Hb_000732_300--Hb_005890_010 Hb_000186_180 Hb_000186_180 Hb_003654_020--Hb_000186_180 Hb_003654_020--Hb_003209_150 Hb_000031_320 Hb_000031_320 Hb_003654_020--Hb_000031_320 Hb_002307_120 Hb_002307_120 Hb_003654_020--Hb_002307_120 Hb_002818_160 Hb_002818_160 Hb_003654_020--Hb_002818_160 Hb_001369_340 Hb_001369_340 Hb_004117_380--Hb_001369_340 Hb_000025_700 Hb_000025_700 Hb_004117_380--Hb_000025_700 Hb_004117_380--Hb_003209_150 Hb_004017_030 Hb_004017_030 Hb_004117_380--Hb_004017_030 Hb_005488_210 Hb_005488_210 Hb_004117_380--Hb_005488_210 Hb_004117_380--Hb_005890_010 Hb_003209_150--Hb_001369_340 Hb_003767_060 Hb_003767_060 Hb_003209_150--Hb_003767_060 Hb_003209_150--Hb_002307_120 Hb_003209_150--Hb_004017_030 Hb_001115_070 Hb_001115_070 Hb_002284_160--Hb_001115_070 Hb_000002_500 Hb_000002_500 Hb_002284_160--Hb_000002_500 Hb_002284_160--Hb_004017_030 Hb_010136_010 Hb_010136_010 Hb_002284_160--Hb_010136_010 Hb_127629_010 Hb_127629_010 Hb_002284_160--Hb_127629_010 Hb_000815_090 Hb_000815_090 Hb_002284_160--Hb_000815_090 Hb_000413_190--Hb_004117_380 Hb_000413_190--Hb_000025_700 Hb_000413_190--Hb_005488_210 Hb_004346_050 Hb_004346_050 Hb_000413_190--Hb_004346_050 Hb_007007_100 Hb_007007_100 Hb_000413_190--Hb_007007_100 Hb_000116_160 Hb_000116_160 Hb_005890_010--Hb_000116_160 Hb_005890_010--Hb_005488_210 Hb_001926_070 Hb_001926_070 Hb_005890_010--Hb_001926_070 Hb_000343_050 Hb_000343_050 Hb_005890_010--Hb_000343_050 Hb_032731_010 Hb_032731_010 Hb_005890_010--Hb_032731_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.272102 0.687079 0.295583 0.00799881 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0152685 0 0 0.647768

CAGE analysis