Hb_000733_110

Information

Type -
Description -
Location Contig733: 80709-81065
Sequence    

Annotation

kegg
ID rcu:RCOM_1483100
description hypothetical protein
nr
ID KDP44860.1
description hypothetical protein JCGZ_01360 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LJM0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01360 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000733_110 0.0 - - hypothetical protein JCGZ_01360 [Jatropha curcas]
2 Hb_001140_230 0.0984546153 - - -
3 Hb_018616_030 0.1911036612 - - hypothetical protein B456_008G198600 [Gossypium raimondii]
4 Hb_001488_050 0.2571248832 transcription factor TF Family: NAC PREDICTED: NAC transcription factor 29-like [Jatropha curcas]
5 Hb_002495_020 0.2629219917 - - hypothetical protein EUGRSUZ_A02403, partial [Eucalyptus grandis]
6 Hb_011113_020 0.2771272957 - - hypothetical protein CICLE_v10018209mg [Citrus clementina]
7 Hb_003102_040 0.2805723653 - - PREDICTED: AT-hook motif nuclear-localized protein 23-like isoform X1 [Jatropha curcas]
8 Hb_000046_130 0.2862668867 - - Peroxidase 27 precursor, putative [Ricinus communis]
9 Hb_002240_030 0.2881360958 - - -
10 Hb_020805_020 0.292681546 - - -
11 Hb_001433_010 0.2942565239 - - -
12 Hb_001140_340 0.2965881195 - - -
13 Hb_001948_010 0.2978737275 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
14 Hb_002392_060 0.309059845 - - gag/pol protein [Bryonia dioica]
15 Hb_002928_080 0.3094153207 - - PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Jatropha curcas]
16 Hb_100821_010 0.3123583638 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
17 Hb_000757_080 0.3191388384 - - vacuolar ATP synthase subunit G plant, putative [Ricinus communis]
18 Hb_155880_010 0.3199943182 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
19 Hb_000504_250 0.3205938476 - - -
20 Hb_181132_010 0.3211855153 - - -

Gene co-expression network

sample Hb_000733_110 Hb_000733_110 Hb_001140_230 Hb_001140_230 Hb_000733_110--Hb_001140_230 Hb_018616_030 Hb_018616_030 Hb_000733_110--Hb_018616_030 Hb_001488_050 Hb_001488_050 Hb_000733_110--Hb_001488_050 Hb_002495_020 Hb_002495_020 Hb_000733_110--Hb_002495_020 Hb_011113_020 Hb_011113_020 Hb_000733_110--Hb_011113_020 Hb_003102_040 Hb_003102_040 Hb_000733_110--Hb_003102_040 Hb_001140_230--Hb_018616_030 Hb_001140_230--Hb_011113_020 Hb_001140_340 Hb_001140_340 Hb_001140_230--Hb_001140_340 Hb_029475_010 Hb_029475_010 Hb_001140_230--Hb_029475_010 Hb_178817_010 Hb_178817_010 Hb_001140_230--Hb_178817_010 Hb_018616_030--Hb_001140_340 Hb_018616_030--Hb_029475_010 Hb_003947_010 Hb_003947_010 Hb_018616_030--Hb_003947_010 Hb_000521_310 Hb_000521_310 Hb_018616_030--Hb_000521_310 Hb_001488_050--Hb_002495_020 Hb_000046_130 Hb_000046_130 Hb_001488_050--Hb_000046_130 Hb_002240_030 Hb_002240_030 Hb_001488_050--Hb_002240_030 Hb_020805_020 Hb_020805_020 Hb_001488_050--Hb_020805_020 Hb_001433_010 Hb_001433_010 Hb_001488_050--Hb_001433_010 Hb_002392_060 Hb_002392_060 Hb_001488_050--Hb_002392_060 Hb_002495_020--Hb_000046_130 Hb_002495_020--Hb_002240_030 Hb_002495_020--Hb_020805_020 Hb_002495_020--Hb_001433_010 Hb_002495_020--Hb_002392_060 Hb_011113_020--Hb_178817_010 Hb_003206_040 Hb_003206_040 Hb_011113_020--Hb_003206_040 Hb_141990_060 Hb_141990_060 Hb_011113_020--Hb_141990_060 Hb_004409_010 Hb_004409_010 Hb_011113_020--Hb_004409_010 Hb_021470_010 Hb_021470_010 Hb_011113_020--Hb_021470_010 Hb_030449_010 Hb_030449_010 Hb_011113_020--Hb_030449_010 Hb_003102_040--Hb_001488_050 Hb_003102_040--Hb_002495_020 Hb_000011_030 Hb_000011_030 Hb_003102_040--Hb_000011_030 Hb_000015_110 Hb_000015_110 Hb_003102_040--Hb_000015_110 Hb_000029_040 Hb_000029_040 Hb_003102_040--Hb_000029_040 Hb_000030_110 Hb_000030_110 Hb_003102_040--Hb_000030_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.81049 0.316291 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.492032 0

CAGE analysis