Hb_000733_250

Information

Type -
Description -
Location Contig733: 199014-200688
Sequence    

Annotation

kegg
ID loa:LOAG_04919
description serine/threonine protein phosphatase PP1 isozyme 1
nr
ID XP_003140504.1
description serine/threonine protein phosphatase PP1 isozyme 1 [Loa loa]
swissprot
ID -
description -
trembl
ID A0A0C2D3A2
description Serine/threonine-protein phosphatase OS=Ancylostoma duodenale GN=ANCDUO_05794 PE=3 SV=1
Gene Ontology
ID GO:0000164
description serine threonine-protein phosphatase pp1 isozyme 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000733_250 0.0 - - serine/threonine protein phosphatase PP1 isozyme 1 [Loa loa]
2 Hb_002320_030 0.0662625254 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
3 Hb_016529_010 0.0952970429 - - polyprotein [Oryza australiensis]
4 Hb_000571_130 0.1905837918 - - kinase, putative [Ricinus communis]
5 Hb_161017_020 0.2640568313 - - hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
6 Hb_000175_650 0.2696833918 - - PREDICTED: cyclin-A2-2-like [Jatropha curcas]
7 Hb_000636_010 0.2750648159 - - PREDICTED: uncharacterized protein LOC105767086 [Gossypium raimondii]
8 Hb_002232_420 0.2787886859 - - Palmitoyltransferase TIP1, putative [Ricinus communis]
9 Hb_124540_020 0.2791655987 - - polyprotein [Citrus endogenous pararetrovirus]
10 Hb_090778_010 0.2791743826 - - PREDICTED: uncharacterized protein LOC105764482 [Gossypium raimondii]
11 Hb_011616_060 0.2791766329 - - PREDICTED: uncharacterized protein LOC105789623 [Gossypium raimondii]
12 Hb_001662_020 0.2791776625 - - PREDICTED: F-box protein SKIP23-like isoform X3 [Eucalyptus grandis]
13 Hb_010783_010 0.2791829106 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_001817_190 0.2791842718 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
15 Hb_001972_020 0.2791864436 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
16 Hb_004019_100 0.2791973648 - - PREDICTED: uncharacterized protein LOC105797448 [Gossypium raimondii]
17 Hb_001309_030 0.2791995912 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_000710_120 0.2792039291 - - hypothetical protein JCGZ_01844 [Jatropha curcas]
19 Hb_026532_010 0.2792077608 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
20 Hb_008976_010 0.2792109978 - - -

Gene co-expression network

sample Hb_000733_250 Hb_000733_250 Hb_002320_030 Hb_002320_030 Hb_000733_250--Hb_002320_030 Hb_016529_010 Hb_016529_010 Hb_000733_250--Hb_016529_010 Hb_000571_130 Hb_000571_130 Hb_000733_250--Hb_000571_130 Hb_161017_020 Hb_161017_020 Hb_000733_250--Hb_161017_020 Hb_000175_650 Hb_000175_650 Hb_000733_250--Hb_000175_650 Hb_000636_010 Hb_000636_010 Hb_000733_250--Hb_000636_010 Hb_002320_030--Hb_016529_010 Hb_097889_010 Hb_097889_010 Hb_002320_030--Hb_097889_010 Hb_011537_090 Hb_011537_090 Hb_002320_030--Hb_011537_090 Hb_009188_010 Hb_009188_010 Hb_002320_030--Hb_009188_010 Hb_008976_010 Hb_008976_010 Hb_002320_030--Hb_008976_010 Hb_016529_010--Hb_000571_130 Hb_016529_010--Hb_000175_650 Hb_000834_110 Hb_000834_110 Hb_016529_010--Hb_000834_110 Hb_016529_010--Hb_000636_010 Hb_000571_130--Hb_000175_650 Hb_000039_140 Hb_000039_140 Hb_000571_130--Hb_000039_140 Hb_007317_040 Hb_007317_040 Hb_000571_130--Hb_007317_040 Hb_000185_110 Hb_000185_110 Hb_000571_130--Hb_000185_110 Hb_000402_140 Hb_000402_140 Hb_161017_020--Hb_000402_140 Hb_001645_020 Hb_001645_020 Hb_161017_020--Hb_001645_020 Hb_001902_170 Hb_001902_170 Hb_161017_020--Hb_001902_170 Hb_000627_200 Hb_000627_200 Hb_161017_020--Hb_000627_200 Hb_182972_020 Hb_182972_020 Hb_161017_020--Hb_182972_020 Hb_179142_010 Hb_179142_010 Hb_161017_020--Hb_179142_010 Hb_000175_650--Hb_000834_110 Hb_020287_010 Hb_020287_010 Hb_000175_650--Hb_020287_010 Hb_002471_010 Hb_002471_010 Hb_000175_650--Hb_002471_010 Hb_000877_010 Hb_000877_010 Hb_000175_650--Hb_000877_010 Hb_001247_260 Hb_001247_260 Hb_000636_010--Hb_001247_260 Hb_000959_050 Hb_000959_050 Hb_000636_010--Hb_000959_050 Hb_028048_020 Hb_028048_020 Hb_000636_010--Hb_028048_020 Hb_080033_020 Hb_080033_020 Hb_000636_010--Hb_080033_020 Hb_032733_030 Hb_032733_030 Hb_000636_010--Hb_032733_030 Hb_003527_020 Hb_003527_020 Hb_000636_010--Hb_003527_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0203023 0 0.0239528 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0934868

CAGE analysis