Hb_000735_080

Information

Type -
Description -
Location Contig735: 140371-155233
Sequence    

Annotation

kegg
ID pop:POPTR_0002s24980g
description POPTRDRAFT_830588; glycosyl transferase family 2 family protein
nr
ID XP_012085176.1
description PREDICTED: probable xyloglucan glycosyltransferase 6 [Jatropha curcas]
swissprot
ID Q9SRT3
description Probable xyloglucan glycosyltransferase 6 OS=Arabidopsis thaliana GN=CSLC6 PE=1 SV=1
trembl
ID A0A067LDJ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15138 PE=4 SV=1
Gene Ontology
ID GO:0000139
description probable xyloglucan glycosyltransferase 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56187: 140598-155202
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000735_080 0.0 - - PREDICTED: probable xyloglucan glycosyltransferase 6 [Jatropha curcas]
2 Hb_004680_010 0.0762323421 - - PREDICTED: uncharacterized protein LOC105636246 isoform X1 [Jatropha curcas]
3 Hb_016734_010 0.0986003858 - - PREDICTED: probable DNA-3-methyladenine glycosylase 2 [Jatropha curcas]
4 Hb_000735_140 0.1121805984 - - 3-glucanase family protein [Populus trichocarpa]
5 Hb_000203_270 0.1178888943 - - alpha-xylosidase, putative [Ricinus communis]
6 Hb_002304_050 0.1184794595 - - pyruvate kinase, putative [Ricinus communis]
7 Hb_000012_240 0.1188421622 - - PREDICTED: ferrochelatase-2, chloroplastic [Jatropha curcas]
8 Hb_000000_480 0.1219297466 - - PREDICTED: deSI-like protein At4g17486 isoform X1 [Jatropha curcas]
9 Hb_004218_130 0.1236104984 - - PREDICTED: uridine 5'-monophosphate synthase [Jatropha curcas]
10 Hb_000062_530 0.1239681166 - - PREDICTED: GDP-mannose transporter GONST3-like [Populus euphratica]
11 Hb_002349_030 0.1244108328 - - conserved hypothetical protein [Ricinus communis]
12 Hb_009372_020 0.1245051458 - - PREDICTED: protein transport protein Sec61 subunit alpha-like [Jatropha curcas]
13 Hb_000197_180 0.1249062548 - - PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase 1 [Jatropha curcas]
14 Hb_000111_370 0.1252099974 - - PREDICTED: cation/H(+) antiporter 2-like [Jatropha curcas]
15 Hb_003670_030 0.1258802181 - - PREDICTED: probable calcium-binding protein CML35 [Jatropha curcas]
16 Hb_013726_050 0.1265436674 - - PREDICTED: probable methyltransferase PMT13 [Jatropha curcas]
17 Hb_018845_010 0.1279902496 - - PREDICTED: uncharacterized protein LOC105642055 [Jatropha curcas]
18 Hb_002739_120 0.1295252449 - - PREDICTED: zinc finger protein ZPR1-like [Jatropha curcas]
19 Hb_000753_160 0.1306904036 - - PREDICTED: uncharacterized protein LOC105640669 [Jatropha curcas]
20 Hb_004109_050 0.1307335745 - - PREDICTED: putative callose synthase 8 [Jatropha curcas]

Gene co-expression network

sample Hb_000735_080 Hb_000735_080 Hb_004680_010 Hb_004680_010 Hb_000735_080--Hb_004680_010 Hb_016734_010 Hb_016734_010 Hb_000735_080--Hb_016734_010 Hb_000735_140 Hb_000735_140 Hb_000735_080--Hb_000735_140 Hb_000203_270 Hb_000203_270 Hb_000735_080--Hb_000203_270 Hb_002304_050 Hb_002304_050 Hb_000735_080--Hb_002304_050 Hb_000012_240 Hb_000012_240 Hb_000735_080--Hb_000012_240 Hb_004680_010--Hb_016734_010 Hb_000111_370 Hb_000111_370 Hb_004680_010--Hb_000111_370 Hb_013726_050 Hb_013726_050 Hb_004680_010--Hb_013726_050 Hb_004680_010--Hb_002304_050 Hb_002445_030 Hb_002445_030 Hb_004680_010--Hb_002445_030 Hb_006683_020 Hb_006683_020 Hb_016734_010--Hb_006683_020 Hb_000173_130 Hb_000173_130 Hb_016734_010--Hb_000173_130 Hb_016734_010--Hb_002445_030 Hb_009372_020 Hb_009372_020 Hb_016734_010--Hb_009372_020 Hb_027760_060 Hb_027760_060 Hb_016734_010--Hb_027760_060 Hb_002849_070 Hb_002849_070 Hb_000735_140--Hb_002849_070 Hb_003849_190 Hb_003849_190 Hb_000735_140--Hb_003849_190 Hb_143766_030 Hb_143766_030 Hb_000735_140--Hb_143766_030 Hb_000735_140--Hb_000111_370 Hb_000056_080 Hb_000056_080 Hb_000735_140--Hb_000056_080 Hb_004987_020 Hb_004987_020 Hb_000203_270--Hb_004987_020 Hb_000203_270--Hb_002849_070 Hb_002739_120 Hb_002739_120 Hb_000203_270--Hb_002739_120 Hb_000200_170 Hb_000200_170 Hb_000203_270--Hb_000200_170 Hb_001135_030 Hb_001135_030 Hb_000203_270--Hb_001135_030 Hb_003599_030 Hb_003599_030 Hb_000203_270--Hb_003599_030 Hb_000753_160 Hb_000753_160 Hb_002304_050--Hb_000753_160 Hb_002304_050--Hb_013726_050 Hb_002687_180 Hb_002687_180 Hb_002304_050--Hb_002687_180 Hb_003449_100 Hb_003449_100 Hb_002304_050--Hb_003449_100 Hb_001250_050 Hb_001250_050 Hb_002304_050--Hb_001250_050 Hb_002272_240 Hb_002272_240 Hb_002304_050--Hb_002272_240 Hb_000711_010 Hb_000711_010 Hb_000012_240--Hb_000711_010 Hb_000666_010 Hb_000666_010 Hb_000012_240--Hb_000666_010 Hb_026198_010 Hb_026198_010 Hb_000012_240--Hb_026198_010 Hb_001956_060 Hb_001956_060 Hb_000012_240--Hb_001956_060 Hb_002349_030 Hb_002349_030 Hb_000012_240--Hb_002349_030 Hb_000704_030 Hb_000704_030 Hb_000012_240--Hb_000704_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.81849 10.7274 12.1391 16.8196 1.92252 1.95896
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.08838 2.68674 5.5263 7.92605 5.21872

CAGE analysis