Hb_000735_110

Information

Type -
Description -
Location Contig735: 170396-174717
Sequence    

Annotation

kegg
ID rcu:RCOM_0242140
description fk506-binding protein, putative (EC:5.2.1.8)
nr
ID XP_002534360.1
description fk506-binding protein, putative [Ricinus communis]
swissprot
ID Q41649
description FK506-binding protein 2 OS=Vicia faba GN=FKBP15 PE=1 SV=1
trembl
ID B9T7Z1
description Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis GN=RCOM_0242140 PE=4 SV=1
Gene Ontology
ID GO:0016853
description peptidyl-prolyl cis-trans isomerase fkbp15-1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56191: 170398-174593
cDNA
(Sanger)
(ID:Location)		 013_F03.ab1: 170537-174580 , 024_J12.ab1: 171314-174525 , 027_B04.ab1: 170661-174585 , 038_G10.ab1: 170536-174593

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000735_110 0.0 - - fk506-binding protein, putative [Ricinus communis]
2 Hb_000141_080 0.0771631325 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial isoform X1 [Brassica rapa]
3 Hb_003929_270 0.0901632765 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
4 Hb_000392_190 0.091808231 - - PREDICTED: NAP1-related protein 2 [Jatropha curcas]
5 Hb_001250_060 0.0940494156 - - PREDICTED: signal recognition particle receptor subunit beta-like [Jatropha curcas]
6 Hb_086085_020 0.1006302646 - - Non-imprinted in Prader-Willi/Angelman syndrome region protein isoform 3 [Theobroma cacao]
7 Hb_002053_140 0.1010852187 - - PREDICTED: coatomer subunit epsilon-1 [Jatropha curcas]
8 Hb_011671_040 0.1014904675 - - PREDICTED: uncharacterized protein LOC105646469 isoform X2 [Jatropha curcas]
9 Hb_009787_030 0.1016956951 - - Prolactin regulatory element-binding protein, putative [Ricinus communis]
10 Hb_002150_040 0.1019432882 - - PREDICTED: CMP-sialic acid transporter 1 isoform X3 [Jatropha curcas]
11 Hb_004127_030 0.1022439263 - - putative Rab geranylgeranyl transferase type II beta subunit family protein [Populus trichocarpa]
12 Hb_002289_080 0.1068047924 - - hypothetical protein POPTR_0016s05590g [Populus trichocarpa]
13 Hb_003633_030 0.1093841723 - - f-actin capping protein alpha, putative [Ricinus communis]
14 Hb_002518_210 0.109656165 - - PREDICTED: mitochondrial uncoupling protein 2 [Jatropha curcas]
15 Hb_002445_120 0.1099321116 - - secretory carrier membrane protein, putative [Ricinus communis]
16 Hb_001366_370 0.1102372611 - - PREDICTED: aarF domain-containing protein kinase 4 isoform X1 [Jatropha curcas]
17 Hb_000768_210 0.1123296245 - - PREDICTED: uncharacterized protein LOC105632522 [Jatropha curcas]
18 Hb_000004_020 0.1127253278 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000140_280 0.1132587265 - - hypothetical protein B456_001G157900 [Gossypium raimondii]
20 Hb_000159_090 0.1133318633 - - hypothetical protein POPTR_0015s153201g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_000735_110 Hb_000735_110 Hb_000141_080 Hb_000141_080 Hb_000735_110--Hb_000141_080 Hb_003929_270 Hb_003929_270 Hb_000735_110--Hb_003929_270 Hb_000392_190 Hb_000392_190 Hb_000735_110--Hb_000392_190 Hb_001250_060 Hb_001250_060 Hb_000735_110--Hb_001250_060 Hb_086085_020 Hb_086085_020 Hb_000735_110--Hb_086085_020 Hb_002053_140 Hb_002053_140 Hb_000735_110--Hb_002053_140 Hb_000141_080--Hb_002053_140 Hb_030736_020 Hb_030736_020 Hb_000141_080--Hb_030736_020 Hb_001366_370 Hb_001366_370 Hb_000141_080--Hb_001366_370 Hb_009787_030 Hb_009787_030 Hb_000141_080--Hb_009787_030 Hb_001427_160 Hb_001427_160 Hb_000141_080--Hb_001427_160 Hb_003929_270--Hb_002053_140 Hb_003929_270--Hb_086085_020 Hb_003929_270--Hb_000141_080 Hb_003929_270--Hb_030736_020 Hb_006618_120 Hb_006618_120 Hb_003929_270--Hb_006618_120 Hb_000140_280 Hb_000140_280 Hb_000392_190--Hb_000140_280 Hb_006277_110 Hb_006277_110 Hb_000392_190--Hb_006277_110 Hb_003940_040 Hb_003940_040 Hb_000392_190--Hb_003940_040 Hb_099878_030 Hb_099878_030 Hb_000392_190--Hb_099878_030 Hb_000392_190--Hb_009787_030 Hb_066768_010 Hb_066768_010 Hb_001250_060--Hb_066768_010 Hb_001250_060--Hb_003929_270 Hb_129672_010 Hb_129672_010 Hb_001250_060--Hb_129672_010 Hb_000326_090 Hb_000326_090 Hb_001250_060--Hb_000326_090 Hb_000167_080 Hb_000167_080 Hb_001250_060--Hb_000167_080 Hb_000310_090 Hb_000310_090 Hb_086085_020--Hb_000310_090 Hb_086085_020--Hb_000141_080 Hb_008970_030 Hb_008970_030 Hb_086085_020--Hb_008970_030 Hb_002289_080 Hb_002289_080 Hb_086085_020--Hb_002289_080 Hb_000768_210 Hb_000768_210 Hb_086085_020--Hb_000768_210 Hb_002053_140--Hb_030736_020 Hb_002053_140--Hb_001427_160 Hb_002053_140--Hb_001366_370 Hb_012796_020 Hb_012796_020 Hb_002053_140--Hb_012796_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
31.9585 10.374 32.5214 97.6443 45.9434 76.3069
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
69.6606 47.4657 39.3554 52.6236 46.8433

CAGE analysis