Hb_000735_150

Information

Type -
Description -
Location Contig735: 187639-187860
Sequence    

Annotation

kegg
ID mdm:103428043
description protein RALF-like 25
nr
ID KDP45878.1
description hypothetical protein JCGZ_15322 [Jatropha curcas]
swissprot
ID A7REH2
description Protein RALF-like 30 OS=Arabidopsis thaliana GN=RALFL30 PE=3 SV=1
trembl
ID A0A067LF70
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15322 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000735_150 0.0 - - hypothetical protein JCGZ_15322 [Jatropha curcas]
2 Hb_124518_010 0.0394459889 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
3 Hb_005357_090 0.0674913474 - - ubiquitin, putative [Ricinus communis]
4 Hb_001930_020 0.0720214545 - - PREDICTED: pectinesterase QRT1 [Jatropha curcas]
5 Hb_002357_050 0.1049831104 - - -
6 Hb_005078_030 0.1406103382 - - -
7 Hb_004757_030 0.1420703861 - - -
8 Hb_001318_090 0.219082389 - - PREDICTED: zinc finger protein 598 [Jatropha curcas]
9 Hb_012725_080 0.2204790896 - - -
10 Hb_006120_100 0.2411169191 - - -
11 Hb_005396_160 0.2462533715 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Jatropha curcas]
12 Hb_043674_060 0.2611724552 - - PREDICTED: uncharacterized protein LOC104240691 [Nicotiana sylvestris]
13 Hb_001190_090 0.2796882483 - - PREDICTED: uncharacterized protein LOC105638813 [Jatropha curcas]
14 Hb_052983_010 0.2857836051 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
15 Hb_004108_030 0.2880672148 - - -
16 Hb_005714_110 0.2883366343 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Jatropha curcas]
17 Hb_000042_190 0.2902678955 - - conserved hypothetical protein [Ricinus communis]
18 Hb_007513_010 0.2942538752 - - -
19 Hb_004321_010 0.3010367002 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_153365_010 0.3046368256 - - PREDICTED: uncharacterized protein LOC104236681 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_000735_150 Hb_000735_150 Hb_124518_010 Hb_124518_010 Hb_000735_150--Hb_124518_010 Hb_005357_090 Hb_005357_090 Hb_000735_150--Hb_005357_090 Hb_001930_020 Hb_001930_020 Hb_000735_150--Hb_001930_020 Hb_002357_050 Hb_002357_050 Hb_000735_150--Hb_002357_050 Hb_005078_030 Hb_005078_030 Hb_000735_150--Hb_005078_030 Hb_004757_030 Hb_004757_030 Hb_000735_150--Hb_004757_030 Hb_124518_010--Hb_005357_090 Hb_124518_010--Hb_001930_020 Hb_124518_010--Hb_002357_050 Hb_124518_010--Hb_005078_030 Hb_124518_010--Hb_004757_030 Hb_005357_090--Hb_001930_020 Hb_005357_090--Hb_002357_050 Hb_005357_090--Hb_005078_030 Hb_005357_090--Hb_004757_030 Hb_001930_020--Hb_002357_050 Hb_001930_020--Hb_005078_030 Hb_001930_020--Hb_004757_030 Hb_002357_050--Hb_005078_030 Hb_002357_050--Hb_004757_030 Hb_005078_030--Hb_004757_030 Hb_001318_090 Hb_001318_090 Hb_005078_030--Hb_001318_090 Hb_012725_080 Hb_012725_080 Hb_005078_030--Hb_012725_080 Hb_004757_030--Hb_001318_090 Hb_004757_030--Hb_012725_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.931429 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.883155 0 0

CAGE analysis