Hb_000735_170

Information

Type -
Description -
Location Contig735: 197397-197846
Sequence    

Annotation

kegg
ID rcu:RCOM_1416590
description hypothetical protein
nr
ID KDP45281.1
description hypothetical protein JCGZ_15146 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LA07
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15146 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000735_170 0.0 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
2 Hb_000940_170 0.2268563575 - - hypothetical protein VITISV_029834 [Vitis vinifera]
3 Hb_000130_070 0.2318077957 - - hypothetical protein JCGZ_14738 [Jatropha curcas]
4 Hb_033555_010 0.2333711884 - - -
5 Hb_001631_100 0.2351235661 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
6 Hb_182680_010 0.2404299084 - - hypothetical protein JCGZ_07831 [Jatropha curcas]
7 Hb_002477_220 0.2571612316 - - hypothetical protein POPTR_0017s06650g [Populus trichocarpa]
8 Hb_009848_010 0.2601725306 - - putative acyl-activating enzyme 16, chloroplastic -like protein [Gossypium arboreum]
9 Hb_169586_010 0.2669456987 - - Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Theobroma cacao]
10 Hb_002477_040 0.2698028444 - - P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 2 [Theobroma cacao]
11 Hb_001780_150 0.2727048091 - - ceramidase, putative [Ricinus communis]
12 Hb_002260_080 0.2743888024 - - Aldehyde dehydrogenase family 6 member B2 [Morus notabilis]
13 Hb_000800_110 0.2748218199 - - NAD dehydrogenase, putative [Ricinus communis]
14 Hb_000022_170 0.2750831306 - - PREDICTED: uncharacterized protein LOC105628473 [Jatropha curcas]
15 Hb_000406_060 0.2778001609 - - hypothetical protein CICLE_v10000115mg [Citrus clementina]
16 Hb_000950_060 0.2780146287 - - PREDICTED: CCAAT/enhancer-binding protein zeta [Jatropha curcas]
17 Hb_007718_020 0.2781164594 - - PREDICTED: receptor-like protein 12 [Camelina sativa]
18 Hb_009898_020 0.2797516708 - - hypothetical protein JCGZ_23951 [Jatropha curcas]
19 Hb_004800_200 0.2813345758 - - -
20 Hb_009467_040 0.2825044147 - - PREDICTED: putative B3 domain-containing protein At3g24850 [Jatropha curcas]

Gene co-expression network

sample Hb_000735_170 Hb_000735_170 Hb_000940_170 Hb_000940_170 Hb_000735_170--Hb_000940_170 Hb_000130_070 Hb_000130_070 Hb_000735_170--Hb_000130_070 Hb_033555_010 Hb_033555_010 Hb_000735_170--Hb_033555_010 Hb_001631_100 Hb_001631_100 Hb_000735_170--Hb_001631_100 Hb_182680_010 Hb_182680_010 Hb_000735_170--Hb_182680_010 Hb_002477_220 Hb_002477_220 Hb_000735_170--Hb_002477_220 Hb_005892_020 Hb_005892_020 Hb_000940_170--Hb_005892_020 Hb_003058_200 Hb_003058_200 Hb_000940_170--Hb_003058_200 Hb_000800_110 Hb_000800_110 Hb_000940_170--Hb_000800_110 Hb_021297_020 Hb_021297_020 Hb_000940_170--Hb_021297_020 Hb_169586_010 Hb_169586_010 Hb_000940_170--Hb_169586_010 Hb_002851_010 Hb_002851_010 Hb_000940_170--Hb_002851_010 Hb_000823_010 Hb_000823_010 Hb_000130_070--Hb_000823_010 Hb_000505_100 Hb_000505_100 Hb_000130_070--Hb_000505_100 Hb_004064_060 Hb_004064_060 Hb_000130_070--Hb_004064_060 Hb_002025_270 Hb_002025_270 Hb_000130_070--Hb_002025_270 Hb_000130_070--Hb_000940_170 Hb_000406_060 Hb_000406_060 Hb_000130_070--Hb_000406_060 Hb_000098_200 Hb_000098_200 Hb_033555_010--Hb_000098_200 Hb_033555_010--Hb_169586_010 Hb_007718_020 Hb_007718_020 Hb_033555_010--Hb_007718_020 Hb_002477_040 Hb_002477_040 Hb_033555_010--Hb_002477_040 Hb_004602_020 Hb_004602_020 Hb_033555_010--Hb_004602_020 Hb_000261_410 Hb_000261_410 Hb_001631_100--Hb_000261_410 Hb_001631_100--Hb_000800_110 Hb_000575_100 Hb_000575_100 Hb_001631_100--Hb_000575_100 Hb_013459_010 Hb_013459_010 Hb_001631_100--Hb_013459_010 Hb_011616_020 Hb_011616_020 Hb_001631_100--Hb_011616_020 Hb_003632_030 Hb_003632_030 Hb_001631_100--Hb_003632_030 Hb_004143_120 Hb_004143_120 Hb_182680_010--Hb_004143_120 Hb_000343_100 Hb_000343_100 Hb_182680_010--Hb_000343_100 Hb_007943_160 Hb_007943_160 Hb_182680_010--Hb_007943_160 Hb_000209_110 Hb_000209_110 Hb_182680_010--Hb_000209_110 Hb_009467_040 Hb_009467_040 Hb_182680_010--Hb_009467_040 Hb_003428_100 Hb_003428_100 Hb_182680_010--Hb_003428_100 Hb_000283_150 Hb_000283_150 Hb_002477_220--Hb_000283_150 Hb_007380_040 Hb_007380_040 Hb_002477_220--Hb_007380_040 Hb_002477_220--Hb_000406_060 Hb_000022_170 Hb_000022_170 Hb_002477_220--Hb_000022_170 Hb_003640_030 Hb_003640_030 Hb_002477_220--Hb_003640_030 Hb_001636_020 Hb_001636_020 Hb_002477_220--Hb_001636_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0681712 1.05583 0.650019 1.39282 2.12888 4.55447
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.160516 0.63041 0.4171 7.74147 2.75606

CAGE analysis