Hb_000739_170

Information

Type -
Description -
Location Contig739: 153613-157651
Sequence    

Annotation

kegg
ID rcu:RCOM_1612250
description PLE, putative
nr
ID XP_012083564.1
description PREDICTED: 65-kDa microtubule-associated protein 4 [Jatropha curcas]
swissprot
ID Q9LZY0
description 65-kDa microtubule-associated protein 4 OS=Arabidopsis thaliana GN=MAP65-4 PE=1 SV=2
trembl
ID A0A067JY14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14518 PE=4 SV=1
Gene Ontology
ID GO:0044763
description 65-kda microtubule-associated protein 4-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56290: 153303-157481
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000739_170 0.0 - - PREDICTED: 65-kDa microtubule-associated protein 4 [Jatropha curcas]
2 Hb_005675_050 0.0937779811 - - alpha-glucosidase, putative [Ricinus communis]
3 Hb_004122_010 0.0993257803 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
4 Hb_002805_180 0.1028187548 - - conserved hypothetical protein [Ricinus communis]
5 Hb_008304_010 0.1038298242 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
6 Hb_002045_010 0.1050474334 - - PREDICTED: F-box/LRR-repeat protein 17 [Jatropha curcas]
7 Hb_004592_010 0.1054100442 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2b-like [Jatropha curcas]
8 Hb_000359_180 0.1065827665 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001524_120 0.1082460715 - - myo-inositol-1 phosphate synthase [Hevea brasiliensis]
10 Hb_004218_140 0.1091015127 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 isoform X3 [Jatropha curcas]
11 Hb_062807_010 0.1112949144 - - hypothetical protein JCGZ_15896 [Jatropha curcas]
12 Hb_000297_210 0.111766117 - - Bipolar kinesin KRP-130, putative [Ricinus communis]
13 Hb_003666_070 0.1154629624 - - PREDICTED: BTB/POZ domain-containing protein At5g66560 [Jatropha curcas]
14 Hb_000120_340 0.1163121565 - - Cucumisin precursor, putative [Ricinus communis]
15 Hb_007632_160 0.1182841562 - - conserved hypothetical protein [Ricinus communis]
16 Hb_121313_010 0.1186447582 - - PREDICTED: endoglucanase 24-like [Jatropha curcas]
17 Hb_000418_170 0.1202949567 - - PREDICTED: ABC transporter C family member 12-like isoform X4 [Populus euphratica]
18 Hb_019570_010 0.1228108913 - - lyase, putative [Ricinus communis]
19 Hb_000627_040 0.123321652 - - leucine-rich repeat protein, putative [Ricinus communis]
20 Hb_001348_040 0.1236063681 - - hypothetical protein VITISV_006651 [Vitis vinifera]

Gene co-expression network

sample Hb_000739_170 Hb_000739_170 Hb_005675_050 Hb_005675_050 Hb_000739_170--Hb_005675_050 Hb_004122_010 Hb_004122_010 Hb_000739_170--Hb_004122_010 Hb_002805_180 Hb_002805_180 Hb_000739_170--Hb_002805_180 Hb_008304_010 Hb_008304_010 Hb_000739_170--Hb_008304_010 Hb_002045_010 Hb_002045_010 Hb_000739_170--Hb_002045_010 Hb_004592_010 Hb_004592_010 Hb_000739_170--Hb_004592_010 Hb_005675_050--Hb_004122_010 Hb_003666_070 Hb_003666_070 Hb_005675_050--Hb_003666_070 Hb_007632_160 Hb_007632_160 Hb_005675_050--Hb_007632_160 Hb_003097_130 Hb_003097_130 Hb_005675_050--Hb_003097_130 Hb_000418_170 Hb_000418_170 Hb_005675_050--Hb_000418_170 Hb_000297_210 Hb_000297_210 Hb_004122_010--Hb_000297_210 Hb_001514_030 Hb_001514_030 Hb_004122_010--Hb_001514_030 Hb_004122_010--Hb_007632_160 Hb_168918_010 Hb_168918_010 Hb_004122_010--Hb_168918_010 Hb_005181_170 Hb_005181_170 Hb_004122_010--Hb_005181_170 Hb_000359_180 Hb_000359_180 Hb_002805_180--Hb_000359_180 Hb_002805_180--Hb_002045_010 Hb_001437_260 Hb_001437_260 Hb_002805_180--Hb_001437_260 Hb_000732_220 Hb_000732_220 Hb_002805_180--Hb_000732_220 Hb_005144_060 Hb_005144_060 Hb_002805_180--Hb_005144_060 Hb_019570_010 Hb_019570_010 Hb_002805_180--Hb_019570_010 Hb_004602_010 Hb_004602_010 Hb_008304_010--Hb_004602_010 Hb_003938_230 Hb_003938_230 Hb_008304_010--Hb_003938_230 Hb_062807_010 Hb_062807_010 Hb_008304_010--Hb_062807_010 Hb_004218_140 Hb_004218_140 Hb_008304_010--Hb_004218_140 Hb_001488_420 Hb_001488_420 Hb_008304_010--Hb_001488_420 Hb_008304_010--Hb_004592_010 Hb_009767_060 Hb_009767_060 Hb_002045_010--Hb_009767_060 Hb_002045_010--Hb_000359_180 Hb_002045_010--Hb_005181_170 Hb_004330_040 Hb_004330_040 Hb_002045_010--Hb_004330_040 Hb_004592_010--Hb_019570_010 Hb_004592_010--Hb_003666_070 Hb_005730_110 Hb_005730_110 Hb_004592_010--Hb_005730_110 Hb_004592_010--Hb_000732_220 Hb_004592_010--Hb_000359_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.288673 3.43826 2.18111 0.0246078 0.0390177
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0190142 0.0149618 0.0284812 0.713328 1.17484

CAGE analysis