Hb_000742_070

Information

Type -
Description -
Location Contig742: 66093-66608
Sequence    

Annotation

kegg
ID cvr:CHLNCDRAFT_51614
description hypothetical protein
nr
ID XP_006078900.1
description PREDICTED: monoglyceride lipase isoform X2 [Bubalus bubalis]
swissprot
ID -
description -
trembl
ID K7W3F4
description Uncharacterized protein OS=Zea mays GN=ZEAMMB73_555067 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000742_070 0.0 - - PREDICTED: monoglyceride lipase isoform X2 [Bubalus bubalis]
2 Hb_023582_030 0.021541742 - - WD-repeat protein, putative [Ricinus communis]
3 Hb_017110_030 0.0245367115 - - PREDICTED: subtilisin-like protease SBT5.4 [Jatropha curcas]
4 Hb_000134_190 0.0425854192 - - hypothetical protein JCGZ_16725 [Jatropha curcas]
5 Hb_000933_030 0.045731371 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
6 Hb_083963_010 0.0490919715 - - PREDICTED: probable carboxylesterase 8 [Jatropha curcas]
7 Hb_186458_010 0.0560798118 desease resistance Gene Name: AAA_29 PREDICTED: ABC transporter G family member 15-like [Populus euphratica]
8 Hb_011549_040 0.0711948495 - - -
9 Hb_004686_040 0.0736545808 - - hypothetical protein POPTR_0016s05690g [Populus trichocarpa]
10 Hb_000815_050 0.0747508199 - - PREDICTED: expansin-A1 [Populus euphratica]
11 Hb_004079_070 0.0910500063 - - hypothetical protein JCGZ_07230 [Jatropha curcas]
12 Hb_012653_050 0.0926990226 - - hypothetical protein RCOM_0460020 [Ricinus communis]
13 Hb_004313_010 0.0935267893 - - PREDICTED: patatin-like protein 1 [Prunus mume]
14 Hb_010577_020 0.0943050945 - - -
15 Hb_166360_010 0.0973802866 - - hypothetical protein POPTR_0010s12130g [Populus trichocarpa]
16 Hb_000816_140 0.0979180661 - - PREDICTED: peroxidase 4-like [Jatropha curcas]
17 Hb_001956_130 0.101589788 - - catalytic, putative [Ricinus communis]
18 Hb_004218_270 0.1024455259 - - hypothetical protein CICLE_v100134152mg, partial [Citrus clementina]
19 Hb_068804_190 0.1027445916 - - kinase, putative [Ricinus communis]
20 Hb_031012_030 0.1033095138 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT5-like [Populus euphratica]

Gene co-expression network

sample Hb_000742_070 Hb_000742_070 Hb_023582_030 Hb_023582_030 Hb_000742_070--Hb_023582_030 Hb_017110_030 Hb_017110_030 Hb_000742_070--Hb_017110_030 Hb_000134_190 Hb_000134_190 Hb_000742_070--Hb_000134_190 Hb_000933_030 Hb_000933_030 Hb_000742_070--Hb_000933_030 Hb_083963_010 Hb_083963_010 Hb_000742_070--Hb_083963_010 Hb_186458_010 Hb_186458_010 Hb_000742_070--Hb_186458_010 Hb_023582_030--Hb_000134_190 Hb_023582_030--Hb_017110_030 Hb_023582_030--Hb_000933_030 Hb_004686_040 Hb_004686_040 Hb_023582_030--Hb_004686_040 Hb_023582_030--Hb_186458_010 Hb_017110_030--Hb_083963_010 Hb_017110_030--Hb_186458_010 Hb_017110_030--Hb_000134_190 Hb_017110_030--Hb_000933_030 Hb_000134_190--Hb_004686_040 Hb_000134_190--Hb_186458_010 Hb_000134_190--Hb_000933_030 Hb_011549_040 Hb_011549_040 Hb_000933_030--Hb_011549_040 Hb_166360_010 Hb_166360_010 Hb_000933_030--Hb_166360_010 Hb_004218_270 Hb_004218_270 Hb_000933_030--Hb_004218_270 Hb_083963_010--Hb_186458_010 Hb_083963_010--Hb_023582_030 Hb_083963_010--Hb_000134_190 Hb_004313_010 Hb_004313_010 Hb_083963_010--Hb_004313_010 Hb_186458_010--Hb_004313_010 Hb_031012_030 Hb_031012_030 Hb_186458_010--Hb_031012_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.259761 0.470611 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.188562

CAGE analysis