Hb_000743_070

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig743: 126708-128285
Sequence    

Annotation

kegg
ID cit:102622621
description putative disease resistance protein RGA4-like
nr
ID KDP26027.1
description hypothetical protein JCGZ_21060 [Jatropha curcas]
swissprot
ID Q9M667
description Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13 PE=2 SV=2
trembl
ID A0A067JQ61
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21060 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000743_070 0.0 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
2 Hb_000127_050 0.0496997134 - - -
3 Hb_020112_010 0.0534752934 - - acyltransferase, putative [Ricinus communis]
4 Hb_004785_150 0.0637897835 - - hypothetical protein JCGZ_25207 [Jatropha curcas]
5 Hb_000496_080 0.0709936341 - - Proteinase inhibitor, putative [Ricinus communis]
6 Hb_010308_010 0.0721499842 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
7 Hb_004330_050 0.0740013913 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000329_570 0.0799444884 - - -
9 Hb_160814_010 0.0904682761 - - PREDICTED: probable sulfate transporter 3.5 isoform X1 [Jatropha curcas]
10 Hb_001300_060 0.0955354647 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
11 Hb_000046_550 0.1003380872 - - PREDICTED: protein ALWAYS EARLY 3 isoform X2 [Jatropha curcas]
12 Hb_005305_170 0.1072296348 - - PREDICTED: probable beta-1,3-galactosyltransferase 8 [Jatropha curcas]
13 Hb_005551_070 0.1094112498 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
14 Hb_003858_050 0.1120827798 - - hypothetical protein PRUPE_ppa021882mg [Prunus persica]
15 Hb_006103_050 0.1306392905 - - -
16 Hb_000705_110 0.1332615024 - - hypothetical protein POPTR_0005s09220g [Populus trichocarpa]
17 Hb_000147_010 0.1483070362 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]
18 Hb_001404_060 0.1486019149 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
19 Hb_003177_100 0.1506581414 - - PREDICTED: auxin-induced protein 6B [Jatropha curcas]
20 Hb_006275_040 0.159000625 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]

Gene co-expression network

sample Hb_000743_070 Hb_000743_070 Hb_000127_050 Hb_000127_050 Hb_000743_070--Hb_000127_050 Hb_020112_010 Hb_020112_010 Hb_000743_070--Hb_020112_010 Hb_004785_150 Hb_004785_150 Hb_000743_070--Hb_004785_150 Hb_000496_080 Hb_000496_080 Hb_000743_070--Hb_000496_080 Hb_010308_010 Hb_010308_010 Hb_000743_070--Hb_010308_010 Hb_004330_050 Hb_004330_050 Hb_000743_070--Hb_004330_050 Hb_000046_550 Hb_000046_550 Hb_000127_050--Hb_000046_550 Hb_003858_050 Hb_003858_050 Hb_000127_050--Hb_003858_050 Hb_005305_170 Hb_005305_170 Hb_000127_050--Hb_005305_170 Hb_005551_070 Hb_005551_070 Hb_000127_050--Hb_005551_070 Hb_160814_010 Hb_160814_010 Hb_000127_050--Hb_160814_010 Hb_020112_010--Hb_000496_080 Hb_020112_010--Hb_010308_010 Hb_020112_010--Hb_004330_050 Hb_001300_060 Hb_001300_060 Hb_020112_010--Hb_001300_060 Hb_000329_570 Hb_000329_570 Hb_020112_010--Hb_000329_570 Hb_004785_150--Hb_000329_570 Hb_004785_150--Hb_020112_010 Hb_004785_150--Hb_000496_080 Hb_004785_150--Hb_010308_010 Hb_004785_150--Hb_001300_060 Hb_000496_080--Hb_010308_010 Hb_000496_080--Hb_004330_050 Hb_000496_080--Hb_001300_060 Hb_000496_080--Hb_000329_570 Hb_010308_010--Hb_004330_050 Hb_010308_010--Hb_001300_060 Hb_010308_010--Hb_000329_570 Hb_004330_050--Hb_001300_060 Hb_004330_050--Hb_000329_570
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.00962429 0.0306606 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0184939 0

CAGE analysis