Hb_000751_090

Information

Type -
Description -
Location Contig751: 110500-111082
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000751_090 0.0 - - -
2 Hb_000109_150 0.15256394 - - conserved hypothetical protein [Ricinus communis]
3 Hb_027556_010 0.1583226378 - - -
4 Hb_005015_010 0.1633211521 - - PREDICTED: programmed cell death protein 2-like [Jatropha curcas]
5 Hb_001158_030 0.1742601872 - - -
6 Hb_000958_010 0.1757123194 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000183_070 0.1795505717 - - -
8 Hb_004032_240 0.1806423352 - - electron transporter, putative [Ricinus communis]
9 Hb_000188_190 0.1850365943 - - -
10 Hb_000977_140 0.1865312782 - - PREDICTED: uncharacterized protein LOC105801335 [Gossypium raimondii]
11 Hb_130177_010 0.1865608234 - - hypothetical protein RCOM_0897890 [Ricinus communis]
12 Hb_186982_030 0.188985324 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000002_330 0.1892494091 - - PREDICTED: actin-related protein 9 [Jatropha curcas]
14 Hb_001902_070 0.1923299611 - - ATP binding protein, putative [Ricinus communis]
15 Hb_002276_190 0.1952231917 - - PREDICTED: uncharacterized protein LOC105640686 [Jatropha curcas]
16 Hb_000500_280 0.1958082941 - - Brassinosteroid-regulated protein BRU1 precursor, putative [Ricinus communis]
17 Hb_015456_020 0.1959701806 - - -
18 Hb_006501_150 0.196444667 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000179_250 0.196476 - - PREDICTED: WD repeat-containing protein 61-like [Citrus sinensis]
20 Hb_005714_040 0.1974624819 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000751_090 Hb_000751_090 Hb_000109_150 Hb_000109_150 Hb_000751_090--Hb_000109_150 Hb_027556_010 Hb_027556_010 Hb_000751_090--Hb_027556_010 Hb_005015_010 Hb_005015_010 Hb_000751_090--Hb_005015_010 Hb_001158_030 Hb_001158_030 Hb_000751_090--Hb_001158_030 Hb_000958_010 Hb_000958_010 Hb_000751_090--Hb_000958_010 Hb_000183_070 Hb_000183_070 Hb_000751_090--Hb_000183_070 Hb_001198_090 Hb_001198_090 Hb_000109_150--Hb_001198_090 Hb_000977_140 Hb_000977_140 Hb_000109_150--Hb_000977_140 Hb_000109_150--Hb_000183_070 Hb_010368_070 Hb_010368_070 Hb_000109_150--Hb_010368_070 Hb_002276_190 Hb_002276_190 Hb_000109_150--Hb_002276_190 Hb_027556_010--Hb_001158_030 Hb_011716_040 Hb_011716_040 Hb_027556_010--Hb_011716_040 Hb_005057_010 Hb_005057_010 Hb_027556_010--Hb_005057_010 Hb_000140_150 Hb_000140_150 Hb_027556_010--Hb_000140_150 Hb_000926_270 Hb_000926_270 Hb_027556_010--Hb_000926_270 Hb_027556_010--Hb_000958_010 Hb_000188_190 Hb_000188_190 Hb_005015_010--Hb_000188_190 Hb_004096_170 Hb_004096_170 Hb_005015_010--Hb_004096_170 Hb_005015_010--Hb_000183_070 Hb_005714_040 Hb_005714_040 Hb_005015_010--Hb_005714_040 Hb_009801_010 Hb_009801_010 Hb_005015_010--Hb_009801_010 Hb_004374_010 Hb_004374_010 Hb_005015_010--Hb_004374_010 Hb_001186_060 Hb_001186_060 Hb_001158_030--Hb_001186_060 Hb_001158_030--Hb_011716_040 Hb_001930_070 Hb_001930_070 Hb_001158_030--Hb_001930_070 Hb_005214_110 Hb_005214_110 Hb_001158_030--Hb_005214_110 Hb_015456_020 Hb_015456_020 Hb_001158_030--Hb_015456_020 Hb_008453_020 Hb_008453_020 Hb_000958_010--Hb_008453_020 Hb_001514_200 Hb_001514_200 Hb_000958_010--Hb_001514_200 Hb_004032_240 Hb_004032_240 Hb_000958_010--Hb_004032_240 Hb_000117_040 Hb_000117_040 Hb_000958_010--Hb_000117_040 Hb_011609_190 Hb_011609_190 Hb_000958_010--Hb_011609_190 Hb_002200_110 Hb_002200_110 Hb_000958_010--Hb_002200_110 Hb_000183_070--Hb_005714_040 Hb_001437_300 Hb_001437_300 Hb_000183_070--Hb_001437_300 Hb_006501_150 Hb_006501_150 Hb_000183_070--Hb_006501_150 Hb_006452_190 Hb_006452_190 Hb_000183_070--Hb_006452_190 Hb_005389_140 Hb_005389_140 Hb_000183_070--Hb_005389_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.730415 0.10353 0.0992606 0 1.4652 0.48719
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.564657 0.443575 0.186661 0.323663 0

CAGE analysis