Hb_000752_020

Information

Type -
Description -
Location Contig752: 72536-77195
Sequence    

Annotation

kegg
ID rcu:RCOM_0979280
description hypothetical protein
nr
ID XP_012081804.1
description PREDICTED: uncharacterized protein LOC105641803 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K0C6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18838 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56864: 73726-74874 , PASA_asmbl_56865: 72368-73639 , PASA_asmbl_56866: 74151-74310
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000752_020 0.0 - - PREDICTED: uncharacterized protein LOC105641803 isoform X1 [Jatropha curcas]
2 Hb_000027_130 0.0880960299 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
3 Hb_000771_070 0.0971664572 - - PREDICTED: plastidial pyruvate kinase 4, chloroplastic [Jatropha curcas]
4 Hb_000473_080 0.1047987817 - - PREDICTED: lipase-like PAD4 [Populus euphratica]
5 Hb_003529_230 0.1307575312 transcription factor TF Family: ERF -
6 Hb_000252_080 0.1316510045 - - PREDICTED: uncharacterized protein LOC105644644 [Jatropha curcas]
7 Hb_005814_010 0.1359522206 - - ATP binding protein, putative [Ricinus communis]
8 Hb_001898_010 0.1427630209 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
9 Hb_004459_110 0.1468772051 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]
10 Hb_073119_010 0.1486320829 - - hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
11 Hb_000402_030 0.1535374781 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
12 Hb_025236_020 0.1540851909 transcription factor TF Family: bHLH hypothetical protein POPTR_0018s11800g [Populus trichocarpa]
13 Hb_000359_080 0.1548698224 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
14 Hb_000003_420 0.1568648656 - - o-methyltransferase, putative [Ricinus communis]
15 Hb_005375_070 0.1595627816 transcription factor TF Family: MYB-related PREDICTED: protein LHY [Jatropha curcas]
16 Hb_000107_440 0.1601101134 rubber biosynthesis Gene Name: Hydroxymethylglutaryl coenzyme A synthase hydroxymethylglutaryl-CoA reductase [Hevea brasiliensis]
17 Hb_002343_020 0.1617148029 - - PREDICTED: AT-hook motif nuclear-localized protein 1 [Jatropha curcas]
18 Hb_006970_150 0.1651548445 - - PREDICTED: uncharacterized protein LOC105650471 [Jatropha curcas]
19 Hb_000451_040 0.1663231667 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003914_050 0.166973743 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]

Gene co-expression network

sample Hb_000752_020 Hb_000752_020 Hb_000027_130 Hb_000027_130 Hb_000752_020--Hb_000027_130 Hb_000771_070 Hb_000771_070 Hb_000752_020--Hb_000771_070 Hb_000473_080 Hb_000473_080 Hb_000752_020--Hb_000473_080 Hb_003529_230 Hb_003529_230 Hb_000752_020--Hb_003529_230 Hb_000252_080 Hb_000252_080 Hb_000752_020--Hb_000252_080 Hb_005814_010 Hb_005814_010 Hb_000752_020--Hb_005814_010 Hb_000027_130--Hb_000771_070 Hb_000027_130--Hb_005814_010 Hb_025236_020 Hb_025236_020 Hb_000027_130--Hb_025236_020 Hb_000402_030 Hb_000402_030 Hb_000027_130--Hb_000402_030 Hb_002910_010 Hb_002910_010 Hb_000027_130--Hb_002910_010 Hb_000771_070--Hb_005814_010 Hb_000771_070--Hb_003529_230 Hb_000771_070--Hb_000402_030 Hb_000771_070--Hb_025236_020 Hb_000359_080 Hb_000359_080 Hb_000473_080--Hb_000359_080 Hb_000003_420 Hb_000003_420 Hb_000473_080--Hb_000003_420 Hb_073119_010 Hb_073119_010 Hb_000473_080--Hb_073119_010 Hb_000103_400 Hb_000103_400 Hb_000473_080--Hb_000103_400 Hb_002272_140 Hb_002272_140 Hb_000473_080--Hb_002272_140 Hb_052434_010 Hb_052434_010 Hb_003529_230--Hb_052434_010 Hb_003529_230--Hb_025236_020 Hb_003529_230--Hb_000402_030 Hb_003529_230--Hb_005814_010 Hb_009083_010 Hb_009083_010 Hb_000252_080--Hb_009083_010 Hb_004459_110 Hb_004459_110 Hb_000252_080--Hb_004459_110 Hb_006970_150 Hb_006970_150 Hb_000252_080--Hb_006970_150 Hb_006120_170 Hb_006120_170 Hb_000252_080--Hb_006120_170 Hb_004235_060 Hb_004235_060 Hb_000252_080--Hb_004235_060 Hb_000495_050 Hb_000495_050 Hb_005814_010--Hb_000495_050 Hb_000031_160 Hb_000031_160 Hb_005814_010--Hb_000031_160 Hb_005814_010--Hb_000402_030 Hb_005814_010--Hb_052434_010 Hb_000552_090 Hb_000552_090 Hb_005814_010--Hb_000552_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.483975 49.4066 21.9202 7.78065 0.808174 0.488162
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.991381 1.75079 1.97345 13.1764 5.97515

CAGE analysis