Hb_000752_080

Information

Type -
Description -
Location Contig752: 191009-192601
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000752_080 0.0 - - -
2 Hb_007040_010 0.1458237986 - - Uncharacterized protein TCM_024356 [Theobroma cacao]
3 Hb_017604_030 0.1925117939 - - -
4 Hb_012184_030 0.2391813813 - - -
5 Hb_185839_010 0.2483780924 - - -
6 Hb_004010_020 0.2504338077 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
7 Hb_008758_010 0.2509181782 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
8 Hb_008206_070 0.2981292569 - - hypothetical protein JCGZ_01495 [Jatropha curcas]
9 Hb_000329_460 0.3017909322 - - PREDICTED: protein transport protein Sec61 subunit beta [Cucumis sativus]
10 Hb_165100_010 0.3018091403 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
11 Hb_003567_020 0.3026819119 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003797_030 0.3029253527 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_025662_020 0.3029370235 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_000646_030 0.3029398631 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
15 Hb_005379_010 0.3029858276 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
16 Hb_074822_010 0.3031448546 - - PREDICTED: uncharacterized protein LOC104088736 isoform X2 [Nicotiana tomentosiformis]
17 Hb_121954_010 0.3031520095 - - PREDICTED: uncharacterized protein LOC105774125 [Gossypium raimondii]
18 Hb_000248_040 0.3031682456 - - PREDICTED: uncharacterized protein LOC105632434 [Jatropha curcas]
19 Hb_003279_010 0.3031771766 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
20 Hb_000300_460 0.3034937362 - - Mavicyanin, putative [Ricinus communis]

Gene co-expression network

sample Hb_000752_080 Hb_000752_080 Hb_007040_010 Hb_007040_010 Hb_000752_080--Hb_007040_010 Hb_017604_030 Hb_017604_030 Hb_000752_080--Hb_017604_030 Hb_012184_030 Hb_012184_030 Hb_000752_080--Hb_012184_030 Hb_185839_010 Hb_185839_010 Hb_000752_080--Hb_185839_010 Hb_004010_020 Hb_004010_020 Hb_000752_080--Hb_004010_020 Hb_008758_010 Hb_008758_010 Hb_000752_080--Hb_008758_010 Hb_007040_010--Hb_008758_010 Hb_007040_010--Hb_004010_020 Hb_000059_120 Hb_000059_120 Hb_007040_010--Hb_000059_120 Hb_007040_010--Hb_012184_030 Hb_008206_070 Hb_008206_070 Hb_007040_010--Hb_008206_070 Hb_031866_030 Hb_031866_030 Hb_017604_030--Hb_031866_030 Hb_002060_040 Hb_002060_040 Hb_017604_030--Hb_002060_040 Hb_009152_030 Hb_009152_030 Hb_017604_030--Hb_009152_030 Hb_033066_030 Hb_033066_030 Hb_017604_030--Hb_033066_030 Hb_000009_010 Hb_000009_010 Hb_017604_030--Hb_000009_010 Hb_004241_030 Hb_004241_030 Hb_012184_030--Hb_004241_030 Hb_000085_030 Hb_000085_030 Hb_012184_030--Hb_000085_030 Hb_012184_030--Hb_017604_030 Hb_004687_010 Hb_004687_010 Hb_012184_030--Hb_004687_010 Hb_180367_010 Hb_180367_010 Hb_185839_010--Hb_180367_010 Hb_020250_020 Hb_020250_020 Hb_185839_010--Hb_020250_020 Hb_017225_010 Hb_017225_010 Hb_185839_010--Hb_017225_010 Hb_165100_010 Hb_165100_010 Hb_185839_010--Hb_165100_010 Hb_003739_040 Hb_003739_040 Hb_185839_010--Hb_003739_040 Hb_003567_020 Hb_003567_020 Hb_185839_010--Hb_003567_020 Hb_004010_020--Hb_008758_010 Hb_061940_010 Hb_061940_010 Hb_004010_020--Hb_061940_010 Hb_186440_010 Hb_186440_010 Hb_004010_020--Hb_186440_010 Hb_097889_010 Hb_097889_010 Hb_004010_020--Hb_097889_010 Hb_012404_010 Hb_012404_010 Hb_008758_010--Hb_012404_010 Hb_031691_010 Hb_031691_010 Hb_008758_010--Hb_031691_010 Hb_027890_010 Hb_027890_010 Hb_008758_010--Hb_027890_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.120059 0 0 0 0.114612 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0220021 0.544274

CAGE analysis