Hb_000753_170

Information

Type -
Description -
Location Contig753: 167227-168854
Sequence    

Annotation

kegg
ID rcu:RCOM_1467500
description hypothetical protein
nr
ID XP_002514606.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q5BPF3
description Protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE OS=Arabidopsis thaliana GN=BASL PE=2 SV=1
trembl
ID B9RLI7
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1467500 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000753_170 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001536_020 0.1421594225 transcription factor TF Family: GRF PREDICTED: uncharacterized protein LOC105631006 [Jatropha curcas]
3 Hb_001755_040 0.1451511884 - - PREDICTED: cyclin-A2-4-like isoform X1 [Jatropha curcas]
4 Hb_004129_060 0.1484311003 - - triacylglycerol lipase, putative [Ricinus communis]
5 Hb_001085_160 0.15110233 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
6 Hb_007574_020 0.1512242134 - - PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
7 Hb_000343_020 0.1562588269 - - PREDICTED: putative Peroxidase 48 [Jatropha curcas]
8 Hb_005568_140 0.1590817631 - - ATP binding protein, putative [Ricinus communis]
9 Hb_001862_050 0.1620698623 - - PREDICTED: lysine-rich arabinogalactan protein 18-like [Jatropha curcas]
10 Hb_002232_310 0.1628169743 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
11 Hb_000638_240 0.1636623876 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0234100-like [Prunus mume]
12 Hb_000742_180 0.1641928041 - - hypothetical protein POPTR_0011s16640g [Populus trichocarpa]
13 Hb_033152_060 0.1651031846 - - PREDICTED: phragmoplast orienting kinesin 2 [Jatropha curcas]
14 Hb_002205_180 0.1666959117 - - PREDICTED: uncharacterized protein LOC105649178 [Jatropha curcas]
15 Hb_004109_100 0.1708737965 - - Interactor of constitutive active rops 1 isoform 1 [Theobroma cacao]
16 Hb_039812_010 0.1715393592 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
17 Hb_024714_090 0.1732518683 rubber biosynthesis Gene Name: SRPP3 PREDICTED: stress-related protein [Jatropha curcas]
18 Hb_002874_120 0.1737116263 - - PREDICTED: calmodulin-like protein 7 [Jatropha curcas]
19 Hb_001571_080 0.1737165771 - - PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Jatropha curcas]
20 Hb_000349_250 0.1738388078 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Jatropha curcas]

Gene co-expression network

sample Hb_000753_170 Hb_000753_170 Hb_001536_020 Hb_001536_020 Hb_000753_170--Hb_001536_020 Hb_001755_040 Hb_001755_040 Hb_000753_170--Hb_001755_040 Hb_004129_060 Hb_004129_060 Hb_000753_170--Hb_004129_060 Hb_001085_160 Hb_001085_160 Hb_000753_170--Hb_001085_160 Hb_007574_020 Hb_007574_020 Hb_000753_170--Hb_007574_020 Hb_000343_020 Hb_000343_020 Hb_000753_170--Hb_000343_020 Hb_000042_390 Hb_000042_390 Hb_001536_020--Hb_000042_390 Hb_001347_030 Hb_001347_030 Hb_001536_020--Hb_001347_030 Hb_010863_030 Hb_010863_030 Hb_001536_020--Hb_010863_030 Hb_012653_010 Hb_012653_010 Hb_001536_020--Hb_012653_010 Hb_173029_030 Hb_173029_030 Hb_001536_020--Hb_173029_030 Hb_002232_310 Hb_002232_310 Hb_001755_040--Hb_002232_310 Hb_004109_100 Hb_004109_100 Hb_001755_040--Hb_004109_100 Hb_000936_030 Hb_000936_030 Hb_001755_040--Hb_000936_030 Hb_001755_040--Hb_007574_020 Hb_003935_090 Hb_003935_090 Hb_001755_040--Hb_003935_090 Hb_010705_040 Hb_010705_040 Hb_001755_040--Hb_010705_040 Hb_001862_050 Hb_001862_050 Hb_004129_060--Hb_001862_050 Hb_004129_060--Hb_000936_030 Hb_003020_190 Hb_003020_190 Hb_004129_060--Hb_003020_190 Hb_000190_220 Hb_000190_220 Hb_004129_060--Hb_000190_220 Hb_004129_060--Hb_001755_040 Hb_003109_010 Hb_003109_010 Hb_004129_060--Hb_003109_010 Hb_024714_090 Hb_024714_090 Hb_001085_160--Hb_024714_090 Hb_001571_080 Hb_001571_080 Hb_001085_160--Hb_001571_080 Hb_000213_020 Hb_000213_020 Hb_001085_160--Hb_000213_020 Hb_000830_010 Hb_000830_010 Hb_001085_160--Hb_000830_010 Hb_004005_060 Hb_004005_060 Hb_001085_160--Hb_004005_060 Hb_005568_140 Hb_005568_140 Hb_001085_160--Hb_005568_140 Hb_007574_020--Hb_003935_090 Hb_007574_020--Hb_004109_100 Hb_007574_020--Hb_002232_310 Hb_007574_020--Hb_005568_140 Hb_002243_030 Hb_002243_030 Hb_007574_020--Hb_002243_030 Hb_002874_120 Hb_002874_120 Hb_000343_020--Hb_002874_120 Hb_009339_040 Hb_009339_040 Hb_000343_020--Hb_009339_040 Hb_002081_060 Hb_002081_060 Hb_000343_020--Hb_002081_060 Hb_004607_020 Hb_004607_020 Hb_000343_020--Hb_004607_020 Hb_011849_030 Hb_011849_030 Hb_000343_020--Hb_011849_030 Hb_033152_060 Hb_033152_060 Hb_000343_020--Hb_033152_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.129598 0.164089 1.55955 0.695911 0.0269401 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0519455 0 0.0840558 0.20888

CAGE analysis