Hb_000753_180

Information

Type -
Description -
Location Contig753: 169456-169992
Sequence    

Annotation

kegg
ID rcu:RCOM_1467510
description Disease resistance response protein, putative
nr
ID XP_012080430.1
description PREDICTED: dirigent protein 22-like [Jatropha curcas]
swissprot
ID Q84TH6
description Dirigent protein 23 OS=Arabidopsis thaliana GN=DIR23 PE=2 SV=1
trembl
ID A0A067K581
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11762 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000753_180 0.0 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
2 Hb_001300_140 0.092331303 - - -
3 Hb_006916_020 0.1011175228 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
4 Hb_011440_010 0.1071371555 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
5 Hb_000836_260 0.1100120867 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
6 Hb_005333_210 0.114460943 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
7 Hb_009150_060 0.1202912244 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
8 Hb_009296_060 0.1205971996 - - glutathione s-transferase, putative [Ricinus communis]
9 Hb_009486_120 0.1234931225 - - hypothetical protein PRUPE_ppa004149mg [Prunus persica]
10 Hb_000215_130 0.1236679136 - - PREDICTED: probable pectinesterase 53 [Jatropha curcas]
11 Hb_000336_280 0.1251933012 - - PREDICTED: uncharacterized protein LOC105632845 [Jatropha curcas]
12 Hb_001358_120 0.1295037671 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
13 Hb_002685_100 0.1337270694 - - low temperature inducible SLTI66 [Glycine max]
14 Hb_001439_040 0.134795118 - - PREDICTED: chorismate mutase 1, chloroplastic [Jatropha curcas]
15 Hb_123560_020 0.1371840878 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
16 Hb_002304_190 0.1375793838 - - PREDICTED: 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase [Jatropha curcas]
17 Hb_000844_090 0.1383006374 - - PREDICTED: cytochrome P450 82C4-like [Jatropha curcas]
18 Hb_001004_130 0.1400607226 - - PREDICTED: chalcone synthase 3 [Jatropha curcas]
19 Hb_001832_110 0.1427403454 - - PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Jatropha curcas]
20 Hb_008376_020 0.1430791379 - - hypothetical protein JCGZ_03321 [Jatropha curcas]

Gene co-expression network

sample Hb_000753_180 Hb_000753_180 Hb_001300_140 Hb_001300_140 Hb_000753_180--Hb_001300_140 Hb_006916_020 Hb_006916_020 Hb_000753_180--Hb_006916_020 Hb_011440_010 Hb_011440_010 Hb_000753_180--Hb_011440_010 Hb_000836_260 Hb_000836_260 Hb_000753_180--Hb_000836_260 Hb_005333_210 Hb_005333_210 Hb_000753_180--Hb_005333_210 Hb_009150_060 Hb_009150_060 Hb_000753_180--Hb_009150_060 Hb_001300_140--Hb_011440_010 Hb_001300_140--Hb_009150_060 Hb_001300_140--Hb_000836_260 Hb_001300_140--Hb_005333_210 Hb_000844_090 Hb_000844_090 Hb_001300_140--Hb_000844_090 Hb_004128_090 Hb_004128_090 Hb_006916_020--Hb_004128_090 Hb_001004_130 Hb_001004_130 Hb_006916_020--Hb_001004_130 Hb_004010_090 Hb_004010_090 Hb_006916_020--Hb_004010_090 Hb_004586_110 Hb_004586_110 Hb_006916_020--Hb_004586_110 Hb_006916_020--Hb_001300_140 Hb_123560_020 Hb_123560_020 Hb_011440_010--Hb_123560_020 Hb_011440_010--Hb_009150_060 Hb_005168_030 Hb_005168_030 Hb_011440_010--Hb_005168_030 Hb_001358_120 Hb_001358_120 Hb_011440_010--Hb_001358_120 Hb_000847_120 Hb_000847_120 Hb_000836_260--Hb_000847_120 Hb_000836_260--Hb_009150_060 Hb_004943_010 Hb_004943_010 Hb_000836_260--Hb_004943_010 Hb_008376_020 Hb_008376_020 Hb_000836_260--Hb_008376_020 Hb_000336_280 Hb_000336_280 Hb_005333_210--Hb_000336_280 Hb_079394_010 Hb_079394_010 Hb_005333_210--Hb_079394_010 Hb_000215_130 Hb_000215_130 Hb_005333_210--Hb_000215_130 Hb_005333_210--Hb_001004_130 Hb_009150_060--Hb_004010_090 Hb_009150_060--Hb_004128_090 Hb_010839_010 Hb_010839_010 Hb_009150_060--Hb_010839_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.483253 2.24113 1.04468 0.0516761 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0940172 0 4.15671 1.78402

CAGE analysis