Hb_000753_230

Information

Type -
Description -
Location Contig753: 237729-242442
Sequence    

Annotation

kegg
ID rcu:RCOM_1468040
description Glycosyltransferase QUASIMODO1, putative
nr
ID XP_012080424.1
description PREDICTED: probable galacturonosyltransferase 11 isoform X1 [Jatropha curcas]
swissprot
ID Q949Q1
description Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1
trembl
ID A0A067K5I3
description Hexosyltransferase OS=Jatropha curcas GN=JCGZ_11758 PE=3 SV=1
Gene Ontology
ID GO:0000139
description probable galacturonosyltransferase 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56930: 239299-239706
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000753_230 0.0 - - PREDICTED: probable galacturonosyltransferase 11 isoform X1 [Jatropha curcas]
2 Hb_000173_470 0.0764286709 - - PREDICTED: BSD domain-containing protein 1 [Jatropha curcas]
3 Hb_003688_180 0.0846825503 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
4 Hb_066920_030 0.0888406256 - - PREDICTED: adagio protein 1 [Jatropha curcas]
5 Hb_038574_010 0.0900681154 - - PREDICTED: vacuolar cation/proton exchanger 3-like isoform X2 [Populus euphratica]
6 Hb_017387_010 0.0907952835 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
7 Hb_020178_040 0.0967135658 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003607_130 0.0971800818 - - serine/threonine protein kinase, putative [Ricinus communis]
9 Hb_000487_270 0.1014283953 - - hypothetical protein JCGZ_22651 [Jatropha curcas]
10 Hb_002272_030 0.1026515099 - - PREDICTED: cation/calcium exchanger 5 [Jatropha curcas]
11 Hb_033594_080 0.1026558956 - - PREDICTED: uncharacterized protein LOC105639993 [Jatropha curcas]
12 Hb_000465_300 0.1030327494 - - PREDICTED: putative dual specificity protein phosphatase DSP8 [Jatropha curcas]
13 Hb_008279_040 0.104470877 - - Rer1 family protein isoform 2 [Theobroma cacao]
14 Hb_000951_130 0.105380772 - - PREDICTED: transcription factor GTE2-like [Jatropha curcas]
15 Hb_001411_140 0.1057830847 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2 [Jatropha curcas]
16 Hb_000152_320 0.1061201539 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000012_310 0.1063142802 - - PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Jatropha curcas]
18 Hb_001189_040 0.1069113563 - - hypothetical protein POPTR_0014s10420g [Populus trichocarpa]
19 Hb_000029_060 0.1087989652 - - PREDICTED: mRNA-decapping enzyme-like protein [Jatropha curcas]
20 Hb_000574_450 0.1101991532 - - PREDICTED: signal recognition particle 54 kDa protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000753_230 Hb_000753_230 Hb_000173_470 Hb_000173_470 Hb_000753_230--Hb_000173_470 Hb_003688_180 Hb_003688_180 Hb_000753_230--Hb_003688_180 Hb_066920_030 Hb_066920_030 Hb_000753_230--Hb_066920_030 Hb_038574_010 Hb_038574_010 Hb_000753_230--Hb_038574_010 Hb_017387_010 Hb_017387_010 Hb_000753_230--Hb_017387_010 Hb_020178_040 Hb_020178_040 Hb_000753_230--Hb_020178_040 Hb_000465_300 Hb_000465_300 Hb_000173_470--Hb_000465_300 Hb_003607_130 Hb_003607_130 Hb_000173_470--Hb_003607_130 Hb_000749_050 Hb_000749_050 Hb_000173_470--Hb_000749_050 Hb_023771_010 Hb_023771_010 Hb_000173_470--Hb_023771_010 Hb_000890_150 Hb_000890_150 Hb_000173_470--Hb_000890_150 Hb_011360_050 Hb_011360_050 Hb_003688_180--Hb_011360_050 Hb_007017_040 Hb_007017_040 Hb_003688_180--Hb_007017_040 Hb_003688_180--Hb_020178_040 Hb_003688_180--Hb_017387_010 Hb_002982_020 Hb_002982_020 Hb_003688_180--Hb_002982_020 Hb_001404_110 Hb_001404_110 Hb_066920_030--Hb_001404_110 Hb_001723_100 Hb_001723_100 Hb_066920_030--Hb_001723_100 Hb_005977_070 Hb_005977_070 Hb_066920_030--Hb_005977_070 Hb_004030_080 Hb_004030_080 Hb_066920_030--Hb_004030_080 Hb_002830_010 Hb_002830_010 Hb_066920_030--Hb_002830_010 Hb_000347_400 Hb_000347_400 Hb_066920_030--Hb_000347_400 Hb_005653_070 Hb_005653_070 Hb_038574_010--Hb_005653_070 Hb_000964_030 Hb_000964_030 Hb_038574_010--Hb_000964_030 Hb_000069_640 Hb_000069_640 Hb_038574_010--Hb_000069_640 Hb_008748_030 Hb_008748_030 Hb_038574_010--Hb_008748_030 Hb_003913_130 Hb_003913_130 Hb_038574_010--Hb_003913_130 Hb_006452_120 Hb_006452_120 Hb_017387_010--Hb_006452_120 Hb_001221_430 Hb_001221_430 Hb_017387_010--Hb_001221_430 Hb_003544_030 Hb_003544_030 Hb_017387_010--Hb_003544_030 Hb_000574_450 Hb_000574_450 Hb_017387_010--Hb_000574_450 Hb_001434_080 Hb_001434_080 Hb_017387_010--Hb_001434_080 Hb_000962_030 Hb_000962_030 Hb_017387_010--Hb_000962_030 Hb_002272_030 Hb_002272_030 Hb_020178_040--Hb_002272_030 Hb_002042_050 Hb_002042_050 Hb_020178_040--Hb_002042_050 Hb_020178_040--Hb_001723_100 Hb_002071_070 Hb_002071_070 Hb_020178_040--Hb_002071_070 Hb_000243_260 Hb_000243_260 Hb_020178_040--Hb_000243_260 Hb_020178_040--Hb_000347_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.05048 8.35089 3.69026 8.19244 2.23736 3.90192
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.17565 6.68361 6.76178 5.37093 5.14266

CAGE analysis