Hb_000753_250

Information

Type -
Description -
Location Contig753: 252669-254144
Sequence    

Annotation

kegg
ID rcu:RCOM_1468070
description hypothetical protein
nr
ID XP_012080422.1
description PREDICTED: uncharacterized protein LOC105640661 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGJ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11756 PE=4 SV=1
Gene Ontology
ID GO:0016787
description adenine nucleotide alpha hydrolases-like superfamily

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000753_250 0.0 - - PREDICTED: uncharacterized protein LOC105640661 [Jatropha curcas]
2 Hb_001268_330 0.1559635584 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
3 Hb_011200_020 0.1601340194 - - aldo-keto reductase, putative [Ricinus communis]
4 Hb_011063_060 0.1665741223 - - PREDICTED: endochitinase-like [Jatropha curcas]
5 Hb_000098_310 0.16671993 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
6 Hb_001504_220 0.1682746154 - - ABC transporter family protein [Hevea brasiliensis]
7 Hb_000230_230 0.174988102 - - hydrolase, putative [Ricinus communis]
8 Hb_000005_230 0.1820393384 - - hypothetical protein POPTR_0009s01160g [Populus trichocarpa]
9 Hb_002835_350 0.1821407093 - - PREDICTED: uncharacterized protein LOC105640319 [Jatropha curcas]
10 Hb_012753_190 0.184102992 - - PREDICTED: protein HAPLESS 2 [Populus euphratica]
11 Hb_003602_070 0.191998444 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH93-like [Jatropha curcas]
12 Hb_032631_050 0.192497065 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
13 Hb_031042_030 0.1929048097 - - PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
14 Hb_012553_020 0.1948176055 - - hypothetical protein JCGZ_09282 [Jatropha curcas]
15 Hb_009545_010 0.1950930671 transcription factor TF Family: GNAT Acetyltransferase [Medicago truncatula]
16 Hb_000915_070 0.2001196857 - - ATP binding protein, putative [Ricinus communis]
17 Hb_032225_040 0.2005302783 - - -
18 Hb_002025_350 0.202469929 - - PREDICTED: glutamate decarboxylase 4 [Jatropha curcas]
19 Hb_000580_070 0.2031858783 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
20 Hb_000029_370 0.2045543081 - - multidrug resistance pump, putative [Ricinus communis]

Gene co-expression network

sample Hb_000753_250 Hb_000753_250 Hb_001268_330 Hb_001268_330 Hb_000753_250--Hb_001268_330 Hb_011200_020 Hb_011200_020 Hb_000753_250--Hb_011200_020 Hb_011063_060 Hb_011063_060 Hb_000753_250--Hb_011063_060 Hb_000098_310 Hb_000098_310 Hb_000753_250--Hb_000098_310 Hb_001504_220 Hb_001504_220 Hb_000753_250--Hb_001504_220 Hb_000230_230 Hb_000230_230 Hb_000753_250--Hb_000230_230 Hb_131864_020 Hb_131864_020 Hb_001268_330--Hb_131864_020 Hb_000204_030 Hb_000204_030 Hb_001268_330--Hb_000204_030 Hb_029510_110 Hb_029510_110 Hb_001268_330--Hb_029510_110 Hb_001104_200 Hb_001104_200 Hb_001268_330--Hb_001104_200 Hb_007044_070 Hb_007044_070 Hb_001268_330--Hb_007044_070 Hb_011200_020--Hb_000098_310 Hb_011200_020--Hb_001504_220 Hb_032225_040 Hb_032225_040 Hb_011200_020--Hb_032225_040 Hb_031042_030 Hb_031042_030 Hb_011200_020--Hb_031042_030 Hb_032631_050 Hb_032631_050 Hb_011200_020--Hb_032631_050 Hb_000421_270 Hb_000421_270 Hb_011200_020--Hb_000421_270 Hb_001660_040 Hb_001660_040 Hb_011063_060--Hb_001660_040 Hb_008225_080 Hb_008225_080 Hb_011063_060--Hb_008225_080 Hb_010334_040 Hb_010334_040 Hb_011063_060--Hb_010334_040 Hb_000288_140 Hb_000288_140 Hb_011063_060--Hb_000288_140 Hb_000025_740 Hb_000025_740 Hb_011063_060--Hb_000025_740 Hb_005010_040 Hb_005010_040 Hb_011063_060--Hb_005010_040 Hb_009823_010 Hb_009823_010 Hb_000098_310--Hb_009823_010 Hb_003576_050 Hb_003576_050 Hb_000098_310--Hb_003576_050 Hb_000181_160 Hb_000181_160 Hb_000098_310--Hb_000181_160 Hb_001408_050 Hb_001408_050 Hb_000098_310--Hb_001408_050 Hb_000098_310--Hb_031042_030 Hb_012553_020 Hb_012553_020 Hb_001504_220--Hb_012553_020 Hb_014037_010 Hb_014037_010 Hb_001504_220--Hb_014037_010 Hb_003399_030 Hb_003399_030 Hb_001504_220--Hb_003399_030 Hb_000152_810 Hb_000152_810 Hb_001504_220--Hb_000152_810 Hb_001504_220--Hb_011063_060 Hb_000230_230--Hb_001104_200 Hb_025526_010 Hb_025526_010 Hb_000230_230--Hb_025526_010 Hb_006788_150 Hb_006788_150 Hb_000230_230--Hb_006788_150 Hb_000230_230--Hb_031042_030 Hb_008768_010 Hb_008768_010 Hb_000230_230--Hb_008768_010 Hb_000580_070 Hb_000580_070 Hb_000230_230--Hb_000580_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.432985 0.342681 0.464205 0.0595976 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.219576 0.0575457 0.103489 2.63785 0.22957

CAGE analysis