Hb_000757_060

Information

Type -
Description -
Location Contig757: 47446-63056
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001141mg
description hypothetical protein
nr
ID XP_007227018.1
description hypothetical protein PRUPE_ppa001141mg [Prunus persica]
swissprot
ID Q7XZU3
description Phosphoinositide phosphatase SAC1 OS=Arabidopsis thaliana GN=SAC1 PE=1 SV=1
trembl
ID M5XQ51
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001141mg PE=4 SV=1
Gene Ontology
ID GO:0016798
description phosphoinositide phosphatase sac1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57059: 49610-50024 , PASA_asmbl_57060: 48152-51021 , PASA_asmbl_57061: 55380-57308 , PASA_asmbl_57062: 58574-61569
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000757_060 0.0 - - hypothetical protein PRUPE_ppa001141mg [Prunus persica]
2 Hb_058999_020 0.0537434763 - - PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Jatropha curcas]
3 Hb_001242_060 0.0551507864 - - PREDICTED: uncharacterized protein LOC105139508 [Populus euphratica]
4 Hb_000538_270 0.0553781796 - - PREDICTED: serine/threonine-protein kinase HT1-like [Citrus sinensis]
5 Hb_002499_040 0.0561880685 - - PREDICTED: probable serine/threonine-protein kinase GCN2 isoform X2 [Jatropha curcas]
6 Hb_000317_240 0.0585659497 - - PREDICTED: protein DYAD [Jatropha curcas]
7 Hb_001248_060 0.0627008763 - - conserved hypothetical protein [Ricinus communis]
8 Hb_035398_020 0.0628160705 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
9 Hb_005779_060 0.0643696868 - - PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
10 Hb_001163_050 0.0646637465 - - PREDICTED: histone deacetylase 9 [Jatropha curcas]
11 Hb_000041_270 0.0647651516 - - PREDICTED: mitochondrial import receptor subunit TOM40-1 [Jatropha curcas]
12 Hb_000289_060 0.0649125793 - - PREDICTED: uncharacterized protein At1g18480 [Jatropha curcas]
13 Hb_003525_010 0.0652902218 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 24-like isoform X1 [Populus euphratica]
14 Hb_000331_550 0.0664612558 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 67 [Jatropha curcas]
15 Hb_010618_010 0.0668052991 - - PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Jatropha curcas]
16 Hb_000016_250 0.0671579496 - - unnamed protein product [Malassezia sympodialis ATCC 42132]
17 Hb_007691_030 0.0672093227 desease resistance Gene Name: AAA PREDICTED: ATPase family AAA domain-containing protein 1-B [Jatropha curcas]
18 Hb_002530_030 0.0673498558 - - PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 4 [Jatropha curcas]
19 Hb_000563_320 0.0680913559 - - PREDICTED: induced during hyphae development protein 1 [Jatropha curcas]
20 Hb_001758_100 0.0682182858 - - basic helix-loop-helix-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000757_060 Hb_000757_060 Hb_058999_020 Hb_058999_020 Hb_000757_060--Hb_058999_020 Hb_001242_060 Hb_001242_060 Hb_000757_060--Hb_001242_060 Hb_000538_270 Hb_000538_270 Hb_000757_060--Hb_000538_270 Hb_002499_040 Hb_002499_040 Hb_000757_060--Hb_002499_040 Hb_000317_240 Hb_000317_240 Hb_000757_060--Hb_000317_240 Hb_001248_060 Hb_001248_060 Hb_000757_060--Hb_001248_060 Hb_005779_060 Hb_005779_060 Hb_058999_020--Hb_005779_060 Hb_000227_080 Hb_000227_080 Hb_058999_020--Hb_000227_080 Hb_000215_110 Hb_000215_110 Hb_058999_020--Hb_000215_110 Hb_000465_460 Hb_000465_460 Hb_058999_020--Hb_000465_460 Hb_002044_080 Hb_002044_080 Hb_058999_020--Hb_002044_080 Hb_031527_040 Hb_031527_040 Hb_001242_060--Hb_031527_040 Hb_000016_250 Hb_000016_250 Hb_001242_060--Hb_000016_250 Hb_000030_300 Hb_000030_300 Hb_001242_060--Hb_000030_300 Hb_000563_320 Hb_000563_320 Hb_001242_060--Hb_000563_320 Hb_001242_060--Hb_005779_060 Hb_007416_180 Hb_007416_180 Hb_000538_270--Hb_007416_180 Hb_002686_030 Hb_002686_030 Hb_000538_270--Hb_002686_030 Hb_000289_060 Hb_000289_060 Hb_000538_270--Hb_000289_060 Hb_001005_190 Hb_001005_190 Hb_000538_270--Hb_001005_190 Hb_001157_040 Hb_001157_040 Hb_000538_270--Hb_001157_040 Hb_002499_040--Hb_000538_270 Hb_000504_140 Hb_000504_140 Hb_002499_040--Hb_000504_140 Hb_000556_160 Hb_000556_160 Hb_002499_040--Hb_000556_160 Hb_002499_040--Hb_002686_030 Hb_001226_040 Hb_001226_040 Hb_002499_040--Hb_001226_040 Hb_002530_030 Hb_002530_030 Hb_000317_240--Hb_002530_030 Hb_000768_090 Hb_000768_090 Hb_000317_240--Hb_000768_090 Hb_000317_240--Hb_000465_460 Hb_000317_240--Hb_058999_020 Hb_000317_240--Hb_000504_140 Hb_010618_010 Hb_010618_010 Hb_001248_060--Hb_010618_010 Hb_001409_020 Hb_001409_020 Hb_001248_060--Hb_001409_020 Hb_011995_010 Hb_011995_010 Hb_001248_060--Hb_011995_010 Hb_001248_060--Hb_000289_060 Hb_015934_040 Hb_015934_040 Hb_001248_060--Hb_015934_040 Hb_001408_040 Hb_001408_040 Hb_001248_060--Hb_001408_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.9914 8.91391 7.58434 7.18116 10.1447 10.9672
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.48569 14.6775 11.7297 10.2617 6.03478

CAGE analysis