Hb_000758_040

Information

Type transcription factor
Description TF Family: ERF
Location Contig758: 29818-30663
Sequence    

Annotation

kegg
ID tcc:TCM_029772
description AP2/ERF domain-containing transcription factor, putative
nr
ID XP_012092418.1
description PREDICTED: ethylene-responsive transcription factor ERF098 [Jatropha curcas]
swissprot
ID O49515
description Ethylene-responsive transcription factor ERF091 OS=Arabidopsis thaliana GN=ERF091 PE=1 SV=1
trembl
ID A0A067JB92
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21508 PE=4 SV=1
Gene Ontology
ID GO:0006950
description ethylene-responsive transcription factor erf091

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000758_040 0.0 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098 [Jatropha curcas]
2 Hb_000816_120 0.2154462885 - - PREDICTED: uncharacterized protein LOC105649214 [Jatropha curcas]
3 Hb_113250_010 0.2488620338 - - -
4 Hb_001190_060 0.2495924572 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 1 protein [Jatropha curcas]
5 Hb_000011_430 0.2679242012 - - zinc finger protein, putative [Ricinus communis]
6 Hb_003096_050 0.2710096724 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000975_150 0.2908800597 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8 isoform X1 [Jatropha curcas]
8 Hb_007894_250 0.2961927707 - - hypothetical protein JCGZ_06575 [Jatropha curcas]
9 Hb_003038_170 0.2995401942 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003636_070 0.3021783316 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000056_330 0.3169322264 - - unnamed protein product [Vitis vinifera]
12 Hb_007520_040 0.3176923767 - - PREDICTED: carbonic anhydrase 2-like [Jatropha curcas]
13 Hb_000445_450 0.3222279006 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
14 Hb_000390_260 0.324703383 transcription factor TF Family: MYB Myb domain protein 107 [Theobroma cacao]
15 Hb_003992_250 0.3256275667 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2-like [Glycine max]
16 Hb_006355_030 0.3257689637 transcription factor TF Family: Orphans sensory transduction histidine kinase bacterial, putative [Ricinus communis]
17 Hb_003788_060 0.3284533098 - - PREDICTED: protein MKS1-like [Populus euphratica]
18 Hb_000926_130 0.3437281454 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
19 Hb_007181_010 0.3499453989 - - polyphenol oxidase [Hevea brasiliensis]
20 Hb_002311_240 0.3503153686 - - hypothetical protein JCGZ_18937 [Jatropha curcas]

Gene co-expression network

sample Hb_000758_040 Hb_000758_040 Hb_000816_120 Hb_000816_120 Hb_000758_040--Hb_000816_120 Hb_113250_010 Hb_113250_010 Hb_000758_040--Hb_113250_010 Hb_001190_060 Hb_001190_060 Hb_000758_040--Hb_001190_060 Hb_000011_430 Hb_000011_430 Hb_000758_040--Hb_000011_430 Hb_003096_050 Hb_003096_050 Hb_000758_040--Hb_003096_050 Hb_000975_150 Hb_000975_150 Hb_000758_040--Hb_000975_150 Hb_000816_120--Hb_001190_060 Hb_000816_120--Hb_003096_050 Hb_000056_330 Hb_000056_330 Hb_000816_120--Hb_000056_330 Hb_000213_130 Hb_000213_130 Hb_000816_120--Hb_000213_130 Hb_010647_010 Hb_010647_010 Hb_000816_120--Hb_010647_010 Hb_012754_040 Hb_012754_040 Hb_113250_010--Hb_012754_040 Hb_113250_010--Hb_000816_120 Hb_000645_110 Hb_000645_110 Hb_113250_010--Hb_000645_110 Hb_113250_010--Hb_001190_060 Hb_003636_070 Hb_003636_070 Hb_113250_010--Hb_003636_070 Hb_001190_060--Hb_003096_050 Hb_001190_060--Hb_000056_330 Hb_003992_250 Hb_003992_250 Hb_001190_060--Hb_003992_250 Hb_000140_160 Hb_000140_160 Hb_001190_060--Hb_000140_160 Hb_002311_240 Hb_002311_240 Hb_001190_060--Hb_002311_240 Hb_000011_430--Hb_003096_050 Hb_000011_430--Hb_000975_150 Hb_002918_230 Hb_002918_230 Hb_000011_430--Hb_002918_230 Hb_000011_430--Hb_000816_120 Hb_000011_430--Hb_001190_060 Hb_003096_050--Hb_000056_330 Hb_007894_250 Hb_007894_250 Hb_003096_050--Hb_007894_250 Hb_003096_050--Hb_002311_240 Hb_003096_050--Hb_000975_150 Hb_004800_170 Hb_004800_170 Hb_000975_150--Hb_004800_170 Hb_000975_150--Hb_007894_250 Hb_000975_150--Hb_000056_330 Hb_000390_260 Hb_000390_260 Hb_000975_150--Hb_000390_260 Hb_000975_150--Hb_001190_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.054574 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0627024 0.0986127 0 0.45817 0

CAGE analysis