Hb_000765_060

Information

Type -
Description -
Location Contig765: 136679-138616
Sequence    

Annotation

kegg
ID rcu:RCOM_1222910
description Alcohol dehydrogenase, putative (EC:1.1.1.284)
nr
ID KHN08829.1
description Alcohol dehydrogenase-like 6 [Glycine soja]
swissprot
ID Q8LEB2
description Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2
trembl
ID A0A0B2PMA3
description Alcohol dehydrogenase-like 6 OS=Glycine soja GN=glysoja_047514 PE=4 SV=1
Gene Ontology
ID GO:0003676
description alcohol dehydrogenase-like 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000765_060 0.0 - - Alcohol dehydrogenase-like 6 [Glycine soja]
2 Hb_008566_040 0.0981613011 - - PREDICTED: uncharacterized protein LOC105647590 isoform X1 [Jatropha curcas]
3 Hb_000057_110 0.1063013881 - - PREDICTED: kinesin-13A [Jatropha curcas]
4 Hb_000072_300 0.1066689612 - - PREDICTED: probable galacturonosyltransferase 9 [Jatropha curcas]
5 Hb_011486_060 0.1110208881 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000244_170 0.111389477 - - PREDICTED: proline-rich receptor-like protein kinase PERK2 [Jatropha curcas]
7 Hb_000181_350 0.1135139009 - - PREDICTED: uncharacterized protein LOC105111090 [Populus euphratica]
8 Hb_005754_040 0.1172028593 - - PREDICTED: uncharacterized protein LOC105636678 isoform X2 [Jatropha curcas]
9 Hb_000197_020 0.1173280178 - - PREDICTED: protein RER1A [Jatropha curcas]
10 Hb_000012_080 0.1174482959 - - PREDICTED: clathrin interactor EPSIN 1 [Jatropha curcas]
11 Hb_000364_170 0.1178565193 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase CLF [Jatropha curcas]
12 Hb_000062_330 0.1212557974 - - unknown [Lotus japonicus]
13 Hb_010407_140 0.1235057404 - - PREDICTED: malate dehydrogenase [Jatropha curcas]
14 Hb_007894_010 0.124302629 - - PREDICTED: uncharacterized protein LOC105632963 [Jatropha curcas]
15 Hb_002193_060 0.1243825497 - - PREDICTED: uncharacterized protein C4orf29 homolog [Pyrus x bretschneideri]
16 Hb_019181_030 0.1267853462 - - PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 6-like [Pyrus x bretschneideri]
17 Hb_000152_600 0.126937965 - - PREDICTED: protein jagunal homolog 1 [Jatropha curcas]
18 Hb_000395_280 0.1296088379 - - PREDICTED: thioredoxin-related transmembrane protein 2 [Vitis vinifera]
19 Hb_010368_050 0.1308262829 - - PREDICTED: uncharacterized protein C1450.15 [Jatropha curcas]
20 Hb_000665_180 0.1309817413 - - PREDICTED: ER membrane protein complex subunit 7 homolog isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000765_060 Hb_000765_060 Hb_008566_040 Hb_008566_040 Hb_000765_060--Hb_008566_040 Hb_000057_110 Hb_000057_110 Hb_000765_060--Hb_000057_110 Hb_000072_300 Hb_000072_300 Hb_000765_060--Hb_000072_300 Hb_011486_060 Hb_011486_060 Hb_000765_060--Hb_011486_060 Hb_000244_170 Hb_000244_170 Hb_000765_060--Hb_000244_170 Hb_000181_350 Hb_000181_350 Hb_000765_060--Hb_000181_350 Hb_003935_060 Hb_003935_060 Hb_008566_040--Hb_003935_060 Hb_000684_260 Hb_000684_260 Hb_008566_040--Hb_000684_260 Hb_000173_060 Hb_000173_060 Hb_008566_040--Hb_000173_060 Hb_002960_150 Hb_002960_150 Hb_008566_040--Hb_002960_150 Hb_000622_350 Hb_000622_350 Hb_008566_040--Hb_000622_350 Hb_000684_030 Hb_000684_030 Hb_000057_110--Hb_000684_030 Hb_000200_300 Hb_000200_300 Hb_000057_110--Hb_000200_300 Hb_000364_170 Hb_000364_170 Hb_000057_110--Hb_000364_170 Hb_000012_080 Hb_000012_080 Hb_000057_110--Hb_000012_080 Hb_006829_060 Hb_006829_060 Hb_000057_110--Hb_006829_060 Hb_008725_270 Hb_008725_270 Hb_000057_110--Hb_008725_270 Hb_003540_050 Hb_003540_050 Hb_000072_300--Hb_003540_050 Hb_002740_080 Hb_002740_080 Hb_000072_300--Hb_002740_080 Hb_000359_290 Hb_000359_290 Hb_000072_300--Hb_000359_290 Hb_002686_080 Hb_002686_080 Hb_000072_300--Hb_002686_080 Hb_005064_010 Hb_005064_010 Hb_000072_300--Hb_005064_010 Hb_000152_600 Hb_000152_600 Hb_000072_300--Hb_000152_600 Hb_000638_070 Hb_000638_070 Hb_011486_060--Hb_000638_070 Hb_003058_100 Hb_003058_100 Hb_011486_060--Hb_003058_100 Hb_011486_060--Hb_002740_080 Hb_011486_060--Hb_000012_080 Hb_011486_060--Hb_000057_110 Hb_000389_030 Hb_000389_030 Hb_011486_060--Hb_000389_030 Hb_003244_020 Hb_003244_020 Hb_000244_170--Hb_003244_020 Hb_000062_330 Hb_000062_330 Hb_000244_170--Hb_000062_330 Hb_013394_050 Hb_013394_050 Hb_000244_170--Hb_013394_050 Hb_007894_010 Hb_007894_010 Hb_000244_170--Hb_007894_010 Hb_002184_090 Hb_002184_090 Hb_000244_170--Hb_002184_090 Hb_000197_020 Hb_000197_020 Hb_000244_170--Hb_000197_020 Hb_001663_040 Hb_001663_040 Hb_000181_350--Hb_001663_040 Hb_007101_110 Hb_007101_110 Hb_000181_350--Hb_007101_110 Hb_000181_350--Hb_000057_110 Hb_000181_350--Hb_000200_300 Hb_000181_350--Hb_000684_030 Hb_000181_350--Hb_000062_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.51236 0.97241 8.84549 12.0785 2.03759 2.17744
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.64974 3.41919 3.35856 3.48586 4.21815

CAGE analysis