Hb_000767_040

Information

Type -
Description -
Location Contig767: 104047-106002
Sequence    

Annotation

kegg
ID rcu:RCOM_0841580
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_002528653.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID P37122
description Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1
trembl
ID B9SRN4
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0841580 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 76a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57449: 104521-105042
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000767_040 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_001274_040 0.1013785104 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
3 Hb_066262_010 0.1036986491 - - hypothetical protein JCGZ_14798 [Jatropha curcas]
4 Hb_005081_060 0.1143567783 - - hypothetical protein EUGRSUZ_C00833 [Eucalyptus grandis]
5 Hb_000111_130 0.1197355426 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
6 Hb_000119_050 0.1209320174 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
7 Hb_003847_140 0.124336225 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
8 Hb_002890_060 0.1267504581 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Eucalyptus grandis]
9 Hb_000656_360 0.127664639 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
10 Hb_176149_010 0.1283434167 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
11 Hb_004652_050 0.133065055 - - hypothetical protein POPTR_0001s15360g [Populus trichocarpa]
12 Hb_000233_060 0.1337944468 - - hypothetical protein JCGZ_14793 [Jatropha curcas]
13 Hb_000318_460 0.1348060947 - - hypothetical protein CICLE_v10028333mg [Citrus clementina]
14 Hb_029866_140 0.1354279535 - - PREDICTED: hevamine-A [Jatropha curcas]
15 Hb_008707_020 0.1368858802 - - ATP binding protein, putative [Ricinus communis]
16 Hb_004586_380 0.1412583497 - - purine transporter, putative [Ricinus communis]
17 Hb_039650_010 0.1417270232 - - cellulose synthase-like protein [Populus tomentosa]
18 Hb_000625_040 0.1431321915 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
19 Hb_001013_010 0.1463074282 - - cytochrome P450, putative [Ricinus communis]
20 Hb_011925_010 0.1463729116 - - PREDICTED: putative disease resistance protein RGA1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000767_040 Hb_000767_040 Hb_001274_040 Hb_001274_040 Hb_000767_040--Hb_001274_040 Hb_066262_010 Hb_066262_010 Hb_000767_040--Hb_066262_010 Hb_005081_060 Hb_005081_060 Hb_000767_040--Hb_005081_060 Hb_000111_130 Hb_000111_130 Hb_000767_040--Hb_000111_130 Hb_000119_050 Hb_000119_050 Hb_000767_040--Hb_000119_050 Hb_003847_140 Hb_003847_140 Hb_000767_040--Hb_003847_140 Hb_001274_040--Hb_000111_130 Hb_002890_060 Hb_002890_060 Hb_001274_040--Hb_002890_060 Hb_000039_100 Hb_000039_100 Hb_001274_040--Hb_000039_100 Hb_000318_460 Hb_000318_460 Hb_001274_040--Hb_000318_460 Hb_008707_020 Hb_008707_020 Hb_001274_040--Hb_008707_020 Hb_066262_010--Hb_003847_140 Hb_000656_360 Hb_000656_360 Hb_066262_010--Hb_000656_360 Hb_000879_100 Hb_000879_100 Hb_066262_010--Hb_000879_100 Hb_005643_010 Hb_005643_010 Hb_066262_010--Hb_005643_010 Hb_000233_060 Hb_000233_060 Hb_066262_010--Hb_000233_060 Hb_119441_010 Hb_119441_010 Hb_066262_010--Hb_119441_010 Hb_005081_060--Hb_003847_140 Hb_039650_010 Hb_039650_010 Hb_005081_060--Hb_039650_010 Hb_005081_060--Hb_000656_360 Hb_005081_060--Hb_001274_040 Hb_005081_060--Hb_008707_020 Hb_001437_200 Hb_001437_200 Hb_005081_060--Hb_001437_200 Hb_000111_130--Hb_002890_060 Hb_000003_620 Hb_000003_620 Hb_000111_130--Hb_000003_620 Hb_001365_040 Hb_001365_040 Hb_000111_130--Hb_001365_040 Hb_009778_030 Hb_009778_030 Hb_000111_130--Hb_009778_030 Hb_000146_110 Hb_000146_110 Hb_000111_130--Hb_000146_110 Hb_001850_010 Hb_001850_010 Hb_000119_050--Hb_001850_010 Hb_000119_050--Hb_001274_040 Hb_030873_010 Hb_030873_010 Hb_000119_050--Hb_030873_010 Hb_000119_050--Hb_000111_130 Hb_000119_050--Hb_005081_060 Hb_003847_140--Hb_000656_360 Hb_003847_140--Hb_008707_020 Hb_011924_030 Hb_011924_030 Hb_003847_140--Hb_011924_030 Hb_029866_140 Hb_029866_140 Hb_003847_140--Hb_029866_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0380153 6.82174 0.0174284 0.654654 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.81979 0.309071

CAGE analysis