Hb_000768_080

Information

Type -
Description -
Location Contig768: 92503-98174
Sequence    

Annotation

kegg
ID rcu:RCOM_1515320
description calmodulin binding protein, putative
nr
ID AIZ94062.1
description Mlo protein [Hevea brasiliensis]
swissprot
ID O49621
description MLO-like protein 1 OS=Arabidopsis thaliana GN=MLO1 PE=1 SV=1
trembl
ID A0A0A7NM61
description MLO-like protein OS=Hevea brasiliensis GN=Mlo1 PE=2 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57507: 92931-94852
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000768_080 0.0 - - Mlo protein [Hevea brasiliensis]
2 Hb_001775_010 0.0511309073 - - conserved hypothetical protein [Ricinus communis]
3 Hb_008864_050 0.0598538651 - - protein binding protein, putative [Ricinus communis]
4 Hb_002600_110 0.0645871185 - - hypothetical protein POPTR_0004s10540g [Populus trichocarpa]
5 Hb_010021_040 0.0713867285 - - PREDICTED: uncharacterized protein LOC105630811 [Jatropha curcas]
6 Hb_001080_290 0.0748339469 - - PSI reaction center subunit II [Citrus sinensis]
7 Hb_002445_020 0.0790314914 - - -
8 Hb_002764_020 0.0851873863 - - hypothetical protein JCGZ_24084 [Jatropha curcas]
9 Hb_001951_050 0.0907570044 - - chlorophyll A/B binding protein, putative [Ricinus communis]
10 Hb_009004_020 0.0933146398 - - PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
11 Hb_183479_030 0.0938583133 - - Photosystem I reaction center subunit V, chloroplast precursor, putative [Ricinus communis]
12 Hb_042123_010 0.0952867777 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Populus euphratica]
13 Hb_048694_010 0.0956030961 - - catalytic, putative [Ricinus communis]
14 Hb_003732_030 0.0960166413 - - gibberellin 20-oxidase, putative [Ricinus communis]
15 Hb_000776_120 0.0979044053 - - PREDICTED: cytochrome P450 78A5 [Jatropha curcas]
16 Hb_003952_030 0.0994506092 - - hypothetical protein JCGZ_16620 [Jatropha curcas]
17 Hb_003622_050 0.0995985139 - - PREDICTED: respiratory burst oxidase homolog protein A-like [Jatropha curcas]
18 Hb_001053_050 0.1016225942 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Vitis vinifera]
19 Hb_001140_110 0.1038383094 - - hypothetical protein JCGZ_26123 [Jatropha curcas]
20 Hb_169492_010 0.1058503154 - - PREDICTED: expansin-like B1 [Jatropha curcas]

Gene co-expression network

sample Hb_000768_080 Hb_000768_080 Hb_001775_010 Hb_001775_010 Hb_000768_080--Hb_001775_010 Hb_008864_050 Hb_008864_050 Hb_000768_080--Hb_008864_050 Hb_002600_110 Hb_002600_110 Hb_000768_080--Hb_002600_110 Hb_010021_040 Hb_010021_040 Hb_000768_080--Hb_010021_040 Hb_001080_290 Hb_001080_290 Hb_000768_080--Hb_001080_290 Hb_002445_020 Hb_002445_020 Hb_000768_080--Hb_002445_020 Hb_001775_010--Hb_008864_050 Hb_001775_010--Hb_001080_290 Hb_001775_010--Hb_010021_040 Hb_001775_010--Hb_002600_110 Hb_001951_050 Hb_001951_050 Hb_001775_010--Hb_001951_050 Hb_008864_050--Hb_010021_040 Hb_003732_030 Hb_003732_030 Hb_008864_050--Hb_003732_030 Hb_000776_120 Hb_000776_120 Hb_008864_050--Hb_000776_120 Hb_004920_080 Hb_004920_080 Hb_008864_050--Hb_004920_080 Hb_183479_030 Hb_183479_030 Hb_002600_110--Hb_183479_030 Hb_048694_010 Hb_048694_010 Hb_002600_110--Hb_048694_010 Hb_002600_110--Hb_001080_290 Hb_002600_110--Hb_002445_020 Hb_010021_040--Hb_004920_080 Hb_018202_040 Hb_018202_040 Hb_010021_040--Hb_018202_040 Hb_005194_050 Hb_005194_050 Hb_010021_040--Hb_005194_050 Hb_001080_290--Hb_001951_050 Hb_001140_110 Hb_001140_110 Hb_001080_290--Hb_001140_110 Hb_077976_010 Hb_077976_010 Hb_001080_290--Hb_077976_010 Hb_042123_010 Hb_042123_010 Hb_001080_290--Hb_042123_010 Hb_001097_110 Hb_001097_110 Hb_001080_290--Hb_001097_110 Hb_002764_020 Hb_002764_020 Hb_002445_020--Hb_002764_020 Hb_000920_340 Hb_000920_340 Hb_002445_020--Hb_000920_340 Hb_002445_020--Hb_042123_010 Hb_007718_040 Hb_007718_040 Hb_002445_020--Hb_007718_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.03429 2.81375 6.0985 0.0317035 0.0322038
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0501738 0.0197383 0 0.0550223 40.8425

CAGE analysis