Hb_000771_120

Information

Type -
Description -
Location Contig771: 76532-82389
Sequence    

Annotation

kegg
ID tcc:TCM_005163
description Plant protein 1589 of Uncharacterized protein function isoform 1
nr
ID XP_012090102.1
description PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JE69
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25992 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57657: 76542-77317
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000771_120 0.0 - - PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
2 Hb_025645_010 0.0608145353 - - PREDICTED: proteasome subunit beta type-5 [Jatropha curcas]
3 Hb_000302_270 0.0643416137 transcription factor TF Family: MYB-related DNA binding protein, putative [Ricinus communis]
4 Hb_003747_200 0.0726892322 - - PREDICTED: DNA cross-link repair protein SNM1 [Jatropha curcas]
5 Hb_007477_070 0.0727420133 - - hypothetical protein JCGZ_17593 [Jatropha curcas]
6 Hb_001404_100 0.073219459 - - PREDICTED: eukaryotic translation initiation factor 3 subunit K [Gossypium raimondii]
7 Hb_028995_040 0.0738329464 - - PREDICTED: protein MODIFIER OF SNC1 11 isoform X1 [Jatropha curcas]
8 Hb_004116_190 0.0747888702 transcription factor TF Family: Alfin-like PREDICTED: PHD finger protein ALFIN-LIKE 2 [Jatropha curcas]
9 Hb_001534_120 0.0757827957 - - PREDICTED: vacuolar protein-sorting-associated protein 37 homolog 1 [Gossypium raimondii]
10 Hb_004491_010 0.0759732077 - - 60S ribosomal protein L51, putative [Ricinus communis]
11 Hb_003078_040 0.0783395808 - - PREDICTED: hit family protein 1 isoform X1 [Jatropha curcas]
12 Hb_000504_140 0.080558676 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 26, chloroplastic-like [Jatropha curcas]
13 Hb_009421_020 0.0809841498 - - PREDICTED: caltractin-like [Jatropha curcas]
14 Hb_000362_200 0.0821462276 - - exonuclease family protein [Populus trichocarpa]
15 Hb_001662_070 0.0824215466 - - PREDICTED: thiol-disulfide oxidoreductase LTO1 [Jatropha curcas]
16 Hb_000010_400 0.0830327605 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 67 [Jatropha curcas]
17 Hb_001305_010 0.0839425592 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic [Jatropha curcas]
18 Hb_002016_150 0.0842007342 - - PREDICTED: uncharacterized protein LOC105642512 [Jatropha curcas]
19 Hb_001552_020 0.0843420931 - - PREDICTED: uncharacterized protein LOC105639653 [Jatropha curcas]
20 Hb_003125_200 0.0844905628 - - PREDICTED: mediator of RNA polymerase II transcription subunit 30 [Jatropha curcas]

Gene co-expression network

sample Hb_000771_120 Hb_000771_120 Hb_025645_010 Hb_025645_010 Hb_000771_120--Hb_025645_010 Hb_000302_270 Hb_000302_270 Hb_000771_120--Hb_000302_270 Hb_003747_200 Hb_003747_200 Hb_000771_120--Hb_003747_200 Hb_007477_070 Hb_007477_070 Hb_000771_120--Hb_007477_070 Hb_001404_100 Hb_001404_100 Hb_000771_120--Hb_001404_100 Hb_028995_040 Hb_028995_040 Hb_000771_120--Hb_028995_040 Hb_001662_070 Hb_001662_070 Hb_025645_010--Hb_001662_070 Hb_000787_050 Hb_000787_050 Hb_025645_010--Hb_000787_050 Hb_003092_040 Hb_003092_040 Hb_025645_010--Hb_003092_040 Hb_001579_030 Hb_001579_030 Hb_025645_010--Hb_001579_030 Hb_025645_010--Hb_007477_070 Hb_000521_320 Hb_000521_320 Hb_000302_270--Hb_000521_320 Hb_000185_070 Hb_000185_070 Hb_000302_270--Hb_000185_070 Hb_000010_400 Hb_000010_400 Hb_000302_270--Hb_000010_400 Hb_004678_040 Hb_004678_040 Hb_000302_270--Hb_004678_040 Hb_000789_060 Hb_000789_060 Hb_000302_270--Hb_000789_060 Hb_002490_020 Hb_002490_020 Hb_003747_200--Hb_002490_020 Hb_003747_200--Hb_000302_270 Hb_002016_150 Hb_002016_150 Hb_003747_200--Hb_002016_150 Hb_142368_010 Hb_142368_010 Hb_003747_200--Hb_142368_010 Hb_002141_030 Hb_002141_030 Hb_003747_200--Hb_002141_030 Hb_001534_120 Hb_001534_120 Hb_007477_070--Hb_001534_120 Hb_001512_060 Hb_001512_060 Hb_007477_070--Hb_001512_060 Hb_007477_070--Hb_001662_070 Hb_007576_040 Hb_007576_040 Hb_007477_070--Hb_007576_040 Hb_010661_030 Hb_010661_030 Hb_001404_100--Hb_010661_030 Hb_005993_040 Hb_005993_040 Hb_001404_100--Hb_005993_040 Hb_002233_150 Hb_002233_150 Hb_001404_100--Hb_002233_150 Hb_002043_190 Hb_002043_190 Hb_001404_100--Hb_002043_190 Hb_004491_010 Hb_004491_010 Hb_001404_100--Hb_004491_010 Hb_001552_020 Hb_001552_020 Hb_028995_040--Hb_001552_020 Hb_000866_270 Hb_000866_270 Hb_028995_040--Hb_000866_270 Hb_028995_040--Hb_004491_010 Hb_004657_050 Hb_004657_050 Hb_028995_040--Hb_004657_050 Hb_003078_040 Hb_003078_040 Hb_028995_040--Hb_003078_040 Hb_002301_140 Hb_002301_140 Hb_028995_040--Hb_002301_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.79059 4.7527 7.22373 3.21035 6.27986 6.49771
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.28578 9.72647 7.77305 5.30293 3.02354

CAGE analysis