Hb_000771_140

Information

Type -
Description -
Location Contig771: 102613-105665
Sequence    

Annotation

kegg
ID rcu:RCOM_1580370
description hypothetical protein
nr
ID XP_012090105.1
description PREDICTED: abscisic acid receptor PYL8 [Jatropha curcas]
swissprot
ID Q9FGM1
description Abscisic acid receptor PYL8 OS=Arabidopsis thaliana GN=PYL8 PE=1 SV=1
trembl
ID A0A067JRL7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25995 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57661: 102621-104258 , PASA_asmbl_57662: 102621-105647
cDNA
(Sanger)
(ID:Location)		 022_H01.ab1: 102711-103179 , 024_D13.ab1: 102712-103305

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000771_140 0.0 - - PREDICTED: abscisic acid receptor PYL8 [Jatropha curcas]
2 Hb_009510_030 0.0679364154 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
3 Hb_000057_060 0.070595299 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]
4 Hb_005245_090 0.0714828803 - - PREDICTED: peroxisomal membrane protein 13 [Jatropha curcas]
5 Hb_026048_090 0.0735743162 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001433_170 0.0797801424 - - PREDICTED: topless-related protein 3 isoform X1 [Jatropha curcas]
7 Hb_000387_080 0.0840354978 - - PREDICTED: protein IQ-DOMAIN 1 isoform X2 [Jatropha curcas]
8 Hb_000809_040 0.0853006752 - - Serine/threonine-protein kinase SAPK10, putative [Ricinus communis]
9 Hb_098709_010 0.0856252204 - - PREDICTED: protein argonaute 1 [Jatropha curcas]
10 Hb_114684_020 0.0881477543 - - beta-1,3-glucanase [Hevea brasiliensis]
11 Hb_001366_220 0.0887439844 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000313_380 0.0887791769 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002506_010 0.0891518868 - - choline transporter-related family protein [Populus trichocarpa]
14 Hb_003404_030 0.0929312007 - - PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like isoform X1 [Jatropha curcas]
15 Hb_003001_030 0.093567154 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
16 Hb_002207_100 0.0964170505 - - PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Jatropha curcas]
17 Hb_000264_190 0.0975408801 - - sphingolipid delta 4 desaturase/C-4 hydroxylase protein des2, putative [Ricinus communis]
18 Hb_000282_060 0.1001486161 - - PREDICTED: uncharacterized protein LOC105638155 [Jatropha curcas]
19 Hb_001017_090 0.1011599393 - - -
20 Hb_127979_010 0.1021958163 - - PREDICTED: uncharacterized protein LOC105629383 [Jatropha curcas]

Gene co-expression network

sample Hb_000771_140 Hb_000771_140 Hb_009510_030 Hb_009510_030 Hb_000771_140--Hb_009510_030 Hb_000057_060 Hb_000057_060 Hb_000771_140--Hb_000057_060 Hb_005245_090 Hb_005245_090 Hb_000771_140--Hb_005245_090 Hb_026048_090 Hb_026048_090 Hb_000771_140--Hb_026048_090 Hb_001433_170 Hb_001433_170 Hb_000771_140--Hb_001433_170 Hb_000387_080 Hb_000387_080 Hb_000771_140--Hb_000387_080 Hb_004126_010 Hb_004126_010 Hb_009510_030--Hb_004126_010 Hb_002506_010 Hb_002506_010 Hb_009510_030--Hb_002506_010 Hb_009510_030--Hb_026048_090 Hb_009510_030--Hb_000057_060 Hb_003001_030 Hb_003001_030 Hb_009510_030--Hb_003001_030 Hb_000057_060--Hb_001433_170 Hb_003404_030 Hb_003404_030 Hb_000057_060--Hb_003404_030 Hb_127979_010 Hb_127979_010 Hb_000057_060--Hb_127979_010 Hb_000057_060--Hb_002506_010 Hb_005941_010 Hb_005941_010 Hb_005245_090--Hb_005941_010 Hb_004242_100 Hb_004242_100 Hb_005245_090--Hb_004242_100 Hb_098709_010 Hb_098709_010 Hb_005245_090--Hb_098709_010 Hb_005245_090--Hb_026048_090 Hb_005245_090--Hb_009510_030 Hb_026048_090--Hb_127979_010 Hb_026048_090--Hb_000057_060 Hb_026048_090--Hb_001433_170 Hb_026048_090--Hb_004126_010 Hb_001433_170--Hb_127979_010 Hb_000179_250 Hb_000179_250 Hb_001433_170--Hb_000179_250 Hb_000176_140 Hb_000176_140 Hb_001433_170--Hb_000176_140 Hb_011609_190 Hb_011609_190 Hb_001433_170--Hb_011609_190 Hb_003057_120 Hb_003057_120 Hb_000387_080--Hb_003057_120 Hb_001366_220 Hb_001366_220 Hb_000387_080--Hb_001366_220 Hb_000387_080--Hb_000057_060 Hb_010174_120 Hb_010174_120 Hb_000387_080--Hb_010174_120 Hb_011174_070 Hb_011174_070 Hb_000387_080--Hb_011174_070 Hb_006602_020 Hb_006602_020 Hb_000387_080--Hb_006602_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
345.547 49.0277 17.833 28.9045 393.385 339.511
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
365.361 232.777 302.1 63.7417 13.1387

CAGE analysis