Hb_000776_120

Information

Type -
Description -
Location Contig776: 143744-146204
Sequence    

Annotation

kegg
ID pxb:103930433
description cytochrome P450 78A5-like
nr
ID XP_012080408.1
description PREDICTED: cytochrome P450 78A5 [Jatropha curcas]
swissprot
ID Q9LMX7
description Cytochrome P450 78A5 OS=Arabidopsis thaliana GN=CYP78A5 PE=2 SV=1
trembl
ID A0A067KGI1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11746 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 78a5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57803: 144028-145629 , PASA_asmbl_57804: 145840-145991
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000776_120 0.0 - - PREDICTED: cytochrome P450 78A5 [Jatropha curcas]
2 Hb_005194_050 0.0753142903 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
3 Hb_003732_030 0.0755868905 - - gibberellin 20-oxidase, putative [Ricinus communis]
4 Hb_004030_010 0.0775648348 - - hypothetical protein CICLE_v10013050mg [Citrus clementina]
5 Hb_008864_050 0.0835457755 - - protein binding protein, putative [Ricinus communis]
6 Hb_002010_010 0.0903347743 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
7 Hb_000768_080 0.0979044053 - - Mlo protein [Hevea brasiliensis]
8 Hb_009004_020 0.1017906572 - - PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
9 Hb_010021_040 0.1046204641 - - PREDICTED: uncharacterized protein LOC105630811 [Jatropha curcas]
10 Hb_001775_010 0.1047741428 - - conserved hypothetical protein [Ricinus communis]
11 Hb_161881_010 0.1113997346 - - laccase, putative [Ricinus communis]
12 Hb_002764_020 0.11450732 - - hypothetical protein JCGZ_24084 [Jatropha curcas]
13 Hb_048694_010 0.118760574 - - catalytic, putative [Ricinus communis]
14 Hb_171685_070 0.1262685422 - - -
15 Hb_011689_070 0.1307293936 - - PREDICTED: pyruvate, phosphate dikinase, chloroplastic [Jatropha curcas]
16 Hb_003947_020 0.1313804045 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
17 Hb_002600_110 0.131672573 - - hypothetical protein POPTR_0004s10540g [Populus trichocarpa]
18 Hb_004920_080 0.1320988154 - - PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Jatropha curcas]
19 Hb_000208_220 0.1327254571 - - -
20 Hb_000336_130 0.1350369297 - - Triacylglycerol lipase 2 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000776_120 Hb_000776_120 Hb_005194_050 Hb_005194_050 Hb_000776_120--Hb_005194_050 Hb_003732_030 Hb_003732_030 Hb_000776_120--Hb_003732_030 Hb_004030_010 Hb_004030_010 Hb_000776_120--Hb_004030_010 Hb_008864_050 Hb_008864_050 Hb_000776_120--Hb_008864_050 Hb_002010_010 Hb_002010_010 Hb_000776_120--Hb_002010_010 Hb_000768_080 Hb_000768_080 Hb_000776_120--Hb_000768_080 Hb_010021_040 Hb_010021_040 Hb_005194_050--Hb_010021_040 Hb_005194_050--Hb_008864_050 Hb_005194_050--Hb_002010_010 Hb_005194_050--Hb_003732_030 Hb_161881_010 Hb_161881_010 Hb_005194_050--Hb_161881_010 Hb_003732_030--Hb_002010_010 Hb_003732_030--Hb_004030_010 Hb_011689_070 Hb_011689_070 Hb_003732_030--Hb_011689_070 Hb_001775_010 Hb_001775_010 Hb_003732_030--Hb_001775_010 Hb_000922_110 Hb_000922_110 Hb_003732_030--Hb_000922_110 Hb_004030_010--Hb_002010_010 Hb_004030_010--Hb_161881_010 Hb_004030_010--Hb_011689_070 Hb_004030_010--Hb_008864_050 Hb_008864_050--Hb_001775_010 Hb_008864_050--Hb_000768_080 Hb_008864_050--Hb_010021_040 Hb_008864_050--Hb_003732_030 Hb_004920_080 Hb_004920_080 Hb_008864_050--Hb_004920_080 Hb_002010_010--Hb_161881_010 Hb_007101_090 Hb_007101_090 Hb_002010_010--Hb_007101_090 Hb_000336_130 Hb_000336_130 Hb_002010_010--Hb_000336_130 Hb_001999_330 Hb_001999_330 Hb_002010_010--Hb_001999_330 Hb_000768_080--Hb_001775_010 Hb_002600_110 Hb_002600_110 Hb_000768_080--Hb_002600_110 Hb_000768_080--Hb_010021_040 Hb_001080_290 Hb_001080_290 Hb_000768_080--Hb_001080_290 Hb_002445_020 Hb_002445_020 Hb_000768_080--Hb_002445_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0130997 1.40505 1.5723 2.285 0.00988539 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0377771 0 0.00751881 27.2182

CAGE analysis