Hb_000777_040

Information

Type -
Description -
Location Contig777: 22269-28270
Sequence    

Annotation

kegg
ID rcu:RCOM_0826280
description serine-threonine kinase receptor-associated protein, putative
nr
ID XP_012078706.1
description PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
swissprot
ID Q54LT8
description Serine-threonine kinase receptor-associated protein OS=Dictyostelium discoideum GN=strap PE=3 SV=1
trembl
ID A0A067KKK8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13274 PE=4 SV=1
Gene Ontology
ID GO:0016301
description serine-threonine kinase receptor-associated

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57855: 27550-28020 , PASA_asmbl_57856: 22758-28042 , PASA_asmbl_57857: 28077-28373
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000777_040 0.0 - - PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
2 Hb_001009_270 0.0573719605 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Jatropha curcas]
3 Hb_001633_050 0.0589834493 - - PREDICTED: histone H2A.Z-specific chaperone CHZ1 [Jatropha curcas]
4 Hb_000985_030 0.0630061586 - - PREDICTED: RRP15-like protein [Populus euphratica]
5 Hb_005779_060 0.066611918 - - PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
6 Hb_000206_210 0.0667269842 - - PREDICTED: G patch domain-containing protein 11 [Jatropha curcas]
7 Hb_058999_020 0.0685750109 - - PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Jatropha curcas]
8 Hb_032202_190 0.0697659359 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 21 [Gossypium raimondii]
9 Hb_000504_140 0.0704971692 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 26, chloroplastic-like [Jatropha curcas]
10 Hb_001821_010 0.0707213866 - - PREDICTED: uncharacterized protein C9orf78 [Jatropha curcas]
11 Hb_000329_320 0.071464948 - - PREDICTED: DNA ligase 1 [Jatropha curcas]
12 Hb_005269_070 0.0718302725 - - PREDICTED: translation factor GUF1 homolog, organellar chromatophore [Jatropha curcas]
13 Hb_004254_120 0.0720383508 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000876_070 0.0736258826 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
15 Hb_007691_030 0.073975599 desease resistance Gene Name: AAA PREDICTED: ATPase family AAA domain-containing protein 1-B [Jatropha curcas]
16 Hb_002739_100 0.0750041885 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X1 [Jatropha curcas]
17 Hb_000815_320 0.0757411309 - - PREDICTED: vesicle transport v-SNARE 12-like isoform X2 [Jatropha curcas]
18 Hb_009838_080 0.0758330324 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]
19 Hb_003177_030 0.0767255175 - - PREDICTED: uncharacterized protein LOC105635357 [Jatropha curcas]
20 Hb_002044_080 0.07676641 - - PREDICTED: secretion-regulating guanine nucleotide exchange factor isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000777_040 Hb_000777_040 Hb_001009_270 Hb_001009_270 Hb_000777_040--Hb_001009_270 Hb_001633_050 Hb_001633_050 Hb_000777_040--Hb_001633_050 Hb_000985_030 Hb_000985_030 Hb_000777_040--Hb_000985_030 Hb_005779_060 Hb_005779_060 Hb_000777_040--Hb_005779_060 Hb_000206_210 Hb_000206_210 Hb_000777_040--Hb_000206_210 Hb_058999_020 Hb_058999_020 Hb_000777_040--Hb_058999_020 Hb_004907_080 Hb_004907_080 Hb_001009_270--Hb_004907_080 Hb_032208_090 Hb_032208_090 Hb_001009_270--Hb_032208_090 Hb_003177_030 Hb_003177_030 Hb_001009_270--Hb_003177_030 Hb_001799_210 Hb_001799_210 Hb_001009_270--Hb_001799_210 Hb_000465_160 Hb_000465_160 Hb_001009_270--Hb_000465_160 Hb_004116_190 Hb_004116_190 Hb_001633_050--Hb_004116_190 Hb_002995_020 Hb_002995_020 Hb_001633_050--Hb_002995_020 Hb_000504_140 Hb_000504_140 Hb_001633_050--Hb_000504_140 Hb_000656_240 Hb_000656_240 Hb_001633_050--Hb_000656_240 Hb_001512_030 Hb_001512_030 Hb_001633_050--Hb_001512_030 Hb_001489_080 Hb_001489_080 Hb_000985_030--Hb_001489_080 Hb_002169_040 Hb_002169_040 Hb_000985_030--Hb_002169_040 Hb_000783_020 Hb_000783_020 Hb_000985_030--Hb_000783_020 Hb_005269_070 Hb_005269_070 Hb_000985_030--Hb_005269_070 Hb_004934_100 Hb_004934_100 Hb_000985_030--Hb_004934_100 Hb_000876_070 Hb_000876_070 Hb_005779_060--Hb_000876_070 Hb_000016_250 Hb_000016_250 Hb_005779_060--Hb_000016_250 Hb_002046_180 Hb_002046_180 Hb_005779_060--Hb_002046_180 Hb_002739_100 Hb_002739_100 Hb_005779_060--Hb_002739_100 Hb_000062_220 Hb_000062_220 Hb_005779_060--Hb_000062_220 Hb_002110_150 Hb_002110_150 Hb_005779_060--Hb_002110_150 Hb_004254_120 Hb_004254_120 Hb_000206_210--Hb_004254_120 Hb_024185_020 Hb_024185_020 Hb_000206_210--Hb_024185_020 Hb_009838_080 Hb_009838_080 Hb_000206_210--Hb_009838_080 Hb_000928_210 Hb_000928_210 Hb_000206_210--Hb_000928_210 Hb_000173_290 Hb_000173_290 Hb_000206_210--Hb_000173_290 Hb_000757_060 Hb_000757_060 Hb_058999_020--Hb_000757_060 Hb_058999_020--Hb_005779_060 Hb_000227_080 Hb_000227_080 Hb_058999_020--Hb_000227_080 Hb_000215_110 Hb_000215_110 Hb_058999_020--Hb_000215_110 Hb_000465_460 Hb_000465_460 Hb_058999_020--Hb_000465_460 Hb_002044_080 Hb_002044_080 Hb_058999_020--Hb_002044_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.9794 7.13642 12.271 11.6401 17.0655 16.3564
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.894 23.735 22.7641 12.5372 11.7723

CAGE analysis