Hb_000784_030

Information

Type -
Description -
Location Contig784: 48347-53800
Sequence    

Annotation

kegg
ID tcc:TCM_036391
description Cytosolic invertase 2 isoform 1
nr
ID ADC68260.1
description neutral/alkaline invertase 2 [Hevea brasiliensis]
swissprot
ID Q67XD9
description Alkaline/neutral invertase CINV2 OS=Arabidopsis thaliana GN=CINV2 PE=1 SV=1
trembl
ID E9KF95
description Neutral/alkaline invertase 2 OS=Hevea brasiliensis GN=NIN2 PE=2 SV=1
Gene Ontology
ID GO:0004575
description probable alkaline neutral invertase d

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58032: 48360-53858 , PASA_asmbl_58034: 50551-50821 , PASA_asmbl_58035: 49883-50194
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000784_030 0.0 - - neutral/alkaline invertase 2 [Hevea brasiliensis]
2 Hb_000562_040 0.0980074854 - - PREDICTED: auxin response factor 5 isoform X1 [Jatropha curcas]
3 Hb_001135_210 0.0985984832 - - PREDICTED: probable adenylate kinase 6, chloroplastic [Jatropha curcas]
4 Hb_000836_130 0.1017230963 - - PREDICTED: uncharacterized protein LOC105642953 isoform X2 [Jatropha curcas]
5 Hb_001232_140 0.1067003207 - - PREDICTED: uncharacterized protein LOC105634966 [Jatropha curcas]
6 Hb_010931_050 0.1214326694 transcription factor TF Family: Jumonji PREDICTED: lysine-specific demethylase JMJ25-like [Jatropha curcas]
7 Hb_003581_260 0.122032836 - - PREDICTED: vacuolar protein sorting-associated protein 29-like [Jatropha curcas]
8 Hb_000368_060 0.1242048791 - - thioredoxin H-type 6 [Hevea brasiliensis]
9 Hb_005839_110 0.1248179151 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Populus euphratica]
10 Hb_000099_130 0.1275357408 - - PREDICTED: uncharacterized protein LOC105645728 [Jatropha curcas]
11 Hb_024714_060 0.1277564807 - - PREDICTED: thiamine pyrophosphokinase 1 isoform X1 [Jatropha curcas]
12 Hb_003929_120 0.1288465112 - - PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Jatropha curcas]
13 Hb_003504_020 0.1304004325 - - PREDICTED: uncharacterized protein LOC105647732 [Jatropha curcas]
14 Hb_000802_100 0.1363586043 - - PREDICTED: uncharacterized protein LOC105634009 [Jatropha curcas]
15 Hb_000103_110 0.1365903633 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Jatropha curcas]
16 Hb_000162_140 0.1365945696 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2 [Jatropha curcas]
17 Hb_000432_050 0.1380012976 - - GTP-binding protein typa/bipa, putative [Ricinus communis]
18 Hb_005539_240 0.1387779759 - - hypothetical protein MIMGU_mgv1a0220462mg, partial [Erythranthe guttata]
19 Hb_000788_080 0.1405156468 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
20 Hb_002759_240 0.1410227882 - - hypothetical protein EUGRSUZ_E01319 [Eucalyptus grandis]

Gene co-expression network

sample Hb_000784_030 Hb_000784_030 Hb_000562_040 Hb_000562_040 Hb_000784_030--Hb_000562_040 Hb_001135_210 Hb_001135_210 Hb_000784_030--Hb_001135_210 Hb_000836_130 Hb_000836_130 Hb_000784_030--Hb_000836_130 Hb_001232_140 Hb_001232_140 Hb_000784_030--Hb_001232_140 Hb_010931_050 Hb_010931_050 Hb_000784_030--Hb_010931_050 Hb_003581_260 Hb_003581_260 Hb_000784_030--Hb_003581_260 Hb_000368_060 Hb_000368_060 Hb_000562_040--Hb_000368_060 Hb_000562_040--Hb_003581_260 Hb_000562_040--Hb_001135_210 Hb_024714_060 Hb_024714_060 Hb_000562_040--Hb_024714_060 Hb_005614_050 Hb_005614_050 Hb_000562_040--Hb_005614_050 Hb_001135_210--Hb_001232_140 Hb_000099_130 Hb_000099_130 Hb_001135_210--Hb_000099_130 Hb_002182_030 Hb_002182_030 Hb_001135_210--Hb_002182_030 Hb_001157_010 Hb_001157_010 Hb_001135_210--Hb_001157_010 Hb_006472_050 Hb_006472_050 Hb_001135_210--Hb_006472_050 Hb_000084_320 Hb_000084_320 Hb_000836_130--Hb_000084_320 Hb_000836_130--Hb_001135_210 Hb_001357_120 Hb_001357_120 Hb_000836_130--Hb_001357_120 Hb_003581_220 Hb_003581_220 Hb_000836_130--Hb_003581_220 Hb_000836_130--Hb_000099_130 Hb_005663_120 Hb_005663_120 Hb_001232_140--Hb_005663_120 Hb_032969_030 Hb_032969_030 Hb_001232_140--Hb_032969_030 Hb_000896_120 Hb_000896_120 Hb_001232_140--Hb_000896_120 Hb_001232_140--Hb_000099_130 Hb_001232_140--Hb_001157_010 Hb_010931_050--Hb_000836_130 Hb_000141_030 Hb_000141_030 Hb_010931_050--Hb_000141_030 Hb_010931_050--Hb_001357_120 Hb_010931_050--Hb_000084_320 Hb_000963_140 Hb_000963_140 Hb_010931_050--Hb_000963_140 Hb_002876_120 Hb_002876_120 Hb_003581_260--Hb_002876_120 Hb_001159_080 Hb_001159_080 Hb_003581_260--Hb_001159_080 Hb_007594_120 Hb_007594_120 Hb_003581_260--Hb_007594_120 Hb_000061_300 Hb_000061_300 Hb_003581_260--Hb_000061_300 Hb_003581_260--Hb_002182_030 Hb_003581_260--Hb_001135_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.6512 10.0692 16.1068 12.8997 13.4889 22.5298
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
122.86 126.191 172.062 23.8578 15.6515

CAGE analysis