Hb_000787_020

Information

Type -
Description -
Location Contig787: 10860-15245
Sequence    

Annotation

kegg
ID pop:POPTR_0001s44610g
description glucose-6-phosphate/phosphate-translocator precursor family protein
nr
ID XP_012070763.1
description PREDICTED: glucose-6-phosphate/phosphate translocator 1, chloroplastic isoform X1 [Jatropha curcas]
swissprot
ID Q9M5A9
description Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1
trembl
ID A0A067KVQ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00835 PE=4 SV=1
Gene Ontology
ID GO:0016021
description glucose-6-phosphate phosphate translocator chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58113: 10869-15164 , PASA_asmbl_58114: 10936-25174
cDNA
(Sanger)
(ID:Location)		 029_H05.ab1: 13566-14860

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000787_020 0.0 - - PREDICTED: glucose-6-phosphate/phosphate translocator 1, chloroplastic isoform X1 [Jatropha curcas]
2 Hb_084646_010 0.0679983015 - - hypothetical protein CICLE_v10031746mg [Citrus clementina]
3 Hb_000890_150 0.0681820797 - - PREDICTED: E3 ubiquitin-protein ligase Topors isoform X1 [Jatropha curcas]
4 Hb_000483_260 0.0701534642 - - PREDICTED: dihydroorotase, mitochondrial isoform X1 [Populus euphratica]
5 Hb_155159_020 0.0703651243 - - PREDICTED: clathrin light chain 1-like [Jatropha curcas]
6 Hb_000049_210 0.0736759443 - - PREDICTED: uncharacterized protein LOC105644460 [Jatropha curcas]
7 Hb_000140_380 0.0739573875 - - PREDICTED: F-box/kelch-repeat protein At3g61590 [Jatropha curcas]
8 Hb_005306_180 0.0773284612 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial-like [Jatropha curcas]
9 Hb_000359_060 0.0789228605 - - PREDICTED: WD repeat-containing protein 26-like [Jatropha curcas]
10 Hb_004078_040 0.0818840379 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 [Jatropha curcas]
11 Hb_001016_120 0.0831793588 - - PREDICTED: 3-dehydroquinate synthase, chloroplastic [Jatropha curcas]
12 Hb_001898_080 0.0833448802 - - PREDICTED: MACPF domain-containing protein At4g24290 isoform X2 [Jatropha curcas]
13 Hb_000173_410 0.0843529966 - - PREDICTED: BI1-like protein [Jatropha curcas]
14 Hb_149985_010 0.084840818 - - PREDICTED: transcription initiation factor IIB-2 [Cucumis sativus]
15 Hb_000329_110 0.085916467 - - PREDICTED: uncharacterized protein LOC105643142 [Jatropha curcas]
16 Hb_001511_060 0.0872603679 - - PREDICTED: sorting and assembly machinery component 50 homolog [Jatropha curcas]
17 Hb_004109_220 0.0882964485 - - PREDICTED: polyadenylate-binding protein-interacting protein 9-like [Populus euphratica]
18 Hb_007416_090 0.0884567653 - - UDP-sugar transporter, putative [Ricinus communis]
19 Hb_000393_020 0.0911550074 - - lipid binding protein, putative [Ricinus communis]
20 Hb_086639_010 0.0913904568 - - ubiquitin-protein ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000787_020 Hb_000787_020 Hb_084646_010 Hb_084646_010 Hb_000787_020--Hb_084646_010 Hb_000890_150 Hb_000890_150 Hb_000787_020--Hb_000890_150 Hb_000483_260 Hb_000483_260 Hb_000787_020--Hb_000483_260 Hb_155159_020 Hb_155159_020 Hb_000787_020--Hb_155159_020 Hb_000049_210 Hb_000049_210 Hb_000787_020--Hb_000049_210 Hb_000140_380 Hb_000140_380 Hb_000787_020--Hb_000140_380 Hb_000116_270 Hb_000116_270 Hb_084646_010--Hb_000116_270 Hb_001016_120 Hb_001016_120 Hb_084646_010--Hb_001016_120 Hb_084646_010--Hb_155159_020 Hb_027380_130 Hb_027380_130 Hb_084646_010--Hb_027380_130 Hb_001159_130 Hb_001159_130 Hb_084646_010--Hb_001159_130 Hb_000359_060 Hb_000359_060 Hb_000890_150--Hb_000359_060 Hb_033594_080 Hb_033594_080 Hb_000890_150--Hb_033594_080 Hb_011218_090 Hb_011218_090 Hb_000890_150--Hb_011218_090 Hb_000890_150--Hb_000049_210 Hb_004078_040 Hb_004078_040 Hb_000890_150--Hb_004078_040 Hb_000460_030 Hb_000460_030 Hb_000483_260--Hb_000460_030 Hb_003994_260 Hb_003994_260 Hb_000483_260--Hb_003994_260 Hb_001218_030 Hb_001218_030 Hb_000483_260--Hb_001218_030 Hb_005306_180 Hb_005306_180 Hb_000483_260--Hb_005306_180 Hb_001314_070 Hb_001314_070 Hb_000483_260--Hb_001314_070 Hb_155159_020--Hb_001159_130 Hb_022115_020 Hb_022115_020 Hb_155159_020--Hb_022115_020 Hb_155159_020--Hb_000116_270 Hb_000603_150 Hb_000603_150 Hb_155159_020--Hb_000603_150 Hb_005054_110 Hb_005054_110 Hb_000049_210--Hb_005054_110 Hb_000710_060 Hb_000710_060 Hb_000049_210--Hb_000710_060 Hb_149985_010 Hb_149985_010 Hb_000049_210--Hb_149985_010 Hb_008725_230 Hb_008725_230 Hb_000049_210--Hb_008725_230 Hb_003847_030 Hb_003847_030 Hb_000049_210--Hb_003847_030 Hb_000252_100 Hb_000252_100 Hb_000140_380--Hb_000252_100 Hb_000140_380--Hb_004078_040 Hb_000173_410 Hb_000173_410 Hb_000140_380--Hb_000173_410 Hb_000140_380--Hb_000890_150 Hb_000454_090 Hb_000454_090 Hb_000140_380--Hb_000454_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
39.5392 39.1164 31.0292 68.037 30.3195 30.809
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
43.2077 57.9221 78.4263 62.031 29.9248

CAGE analysis