Hb_000791_050

Information

Type -
Description -
Location Contig791: 103106-106246
Sequence    

Annotation

kegg
ID rcu:RCOM_0274300
description hypothetical protein
nr
ID XP_012075494.1
description PREDICTED: uncharacterized protein LOC105636760 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KJ95
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10997 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58355: 104817-105239 , PASA_asmbl_58356: 103570-106281 , PASA_asmbl_58357: 105454-105641
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000791_050 0.0 - - PREDICTED: uncharacterized protein LOC105636760 [Jatropha curcas]
2 Hb_000318_170 0.0960866923 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
3 Hb_001221_390 0.1115016222 - - Phospholipase C 4 precursor, putative [Ricinus communis]
4 Hb_027380_150 0.113140573 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000737_010 0.1257268965 - - PREDICTED: putative E3 ubiquitin-protein ligase RING1a isoform X1 [Jatropha curcas]
6 Hb_010050_020 0.1263543948 - - PREDICTED: uncharacterized protein LOC102601222 [Solanum tuberosum]
7 Hb_000438_010 0.129309729 - - -
8 Hb_000309_030 0.13097386 - - PREDICTED: formate dehydrogenase, mitochondrial [Jatropha curcas]
9 Hb_000061_310 0.136198065 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]
10 Hb_023226_030 0.1384125585 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Jatropha curcas]
11 Hb_001277_400 0.1401397373 transcription factor TF Family: Tify PREDICTED: protein TIFY 4B isoform X3 [Jatropha curcas]
12 Hb_000230_360 0.1405395872 - - PREDICTED: BI1-like protein [Jatropha curcas]
13 Hb_005485_070 0.143307582 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
14 Hb_004855_020 0.1441375581 - - hypothetical protein POPTR_0006s10010g [Populus trichocarpa]
15 Hb_012760_090 0.1442525747 - - Aspartic proteinase-like protein 1 [Morus notabilis]
16 Hb_000116_240 0.1450821069 transcription factor TF Family: HB homeobox-leucine zipper family protein [Populus trichocarpa]
17 Hb_007575_030 0.1456262092 - - PREDICTED: protein RCC2 homolog [Jatropha curcas]
18 Hb_004883_020 0.1457602286 - - PREDICTED: uncharacterized protein LOC105647351 [Jatropha curcas]
19 Hb_005724_040 0.1458250163 - - hypothetical protein JCGZ_13142 [Jatropha curcas]
20 Hb_000085_380 0.149226543 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000791_050 Hb_000791_050 Hb_000318_170 Hb_000318_170 Hb_000791_050--Hb_000318_170 Hb_001221_390 Hb_001221_390 Hb_000791_050--Hb_001221_390 Hb_027380_150 Hb_027380_150 Hb_000791_050--Hb_027380_150 Hb_000737_010 Hb_000737_010 Hb_000791_050--Hb_000737_010 Hb_010050_020 Hb_010050_020 Hb_000791_050--Hb_010050_020 Hb_000438_010 Hb_000438_010 Hb_000791_050--Hb_000438_010 Hb_005485_070 Hb_005485_070 Hb_000318_170--Hb_005485_070 Hb_000309_030 Hb_000309_030 Hb_000318_170--Hb_000309_030 Hb_000116_240 Hb_000116_240 Hb_000318_170--Hb_000116_240 Hb_000731_210 Hb_000731_210 Hb_000318_170--Hb_000731_210 Hb_007575_030 Hb_007575_030 Hb_000318_170--Hb_007575_030 Hb_001221_390--Hb_010050_020 Hb_005724_040 Hb_005724_040 Hb_001221_390--Hb_005724_040 Hb_001221_390--Hb_000318_170 Hb_000085_380 Hb_000085_380 Hb_001221_390--Hb_000085_380 Hb_012760_090 Hb_012760_090 Hb_001221_390--Hb_012760_090 Hb_027380_150--Hb_010050_020 Hb_000776_040 Hb_000776_040 Hb_027380_150--Hb_000776_040 Hb_021409_070 Hb_021409_070 Hb_027380_150--Hb_021409_070 Hb_189003_070 Hb_189003_070 Hb_027380_150--Hb_189003_070 Hb_012807_150 Hb_012807_150 Hb_027380_150--Hb_012807_150 Hb_000737_010--Hb_000438_010 Hb_000737_010--Hb_007575_030 Hb_000165_070 Hb_000165_070 Hb_000737_010--Hb_000165_070 Hb_004096_220 Hb_004096_220 Hb_000737_010--Hb_004096_220 Hb_000936_090 Hb_000936_090 Hb_000737_010--Hb_000936_090 Hb_010050_020--Hb_012760_090 Hb_000622_330 Hb_000622_330 Hb_010050_020--Hb_000622_330 Hb_002641_160 Hb_002641_160 Hb_010050_020--Hb_002641_160 Hb_004522_030 Hb_004522_030 Hb_010050_020--Hb_004522_030 Hb_000012_400 Hb_000012_400 Hb_010050_020--Hb_000012_400 Hb_000438_010--Hb_004096_220 Hb_000438_010--Hb_000318_170 Hb_000438_010--Hb_007575_030 Hb_000261_310 Hb_000261_310 Hb_000438_010--Hb_000261_310 Hb_003106_110 Hb_003106_110 Hb_000438_010--Hb_003106_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.1562 22.231 44.8459 43.8721 1.69719 3.8824
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.8465 1.12268 1.20866 30.4499 31.3012

CAGE analysis