Hb_000795_010

Information

Type -
Description -
Location Contig795: 62443-63195
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000795_010 0.0 - - -
2 Hb_004829_020 0.1092447387 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_012340_040 0.1132249952 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Populus euphratica]
4 Hb_006692_050 0.122981479 - - Chloroplastic lipocalin [Theobroma cacao]
5 Hb_007761_010 0.1348590746 - - -
6 Hb_128173_010 0.136070239 - - PREDICTED: uncharacterized protein LOC104219073 [Nicotiana sylvestris]
7 Hb_042026_010 0.1471714183 - - RNA binding protein, putative [Ricinus communis]
8 Hb_111332_010 0.1497492072 - - Dihydroneopterin aldolase [Morus notabilis]
9 Hb_105480_010 0.1580948229 - - -
10 Hb_005542_020 0.1739499812 - - lupus la ribonucleoprotein, putative [Ricinus communis]
11 Hb_004282_030 0.1825833555 - - hypothetical protein EUGRSUZ_B01857 [Eucalyptus grandis]
12 Hb_013727_010 0.2079718087 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
13 Hb_000510_070 0.2142249578 - - PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Beta vulgaris subsp. vulgaris]
14 Hb_000004_140 0.2228539795 - - -
15 Hb_000005_210 0.2349956759 - - -
16 Hb_000041_170 0.2349956759 - - PREDICTED: uncharacterized protein At4g02000-like [Eucalyptus grandis]
17 Hb_000047_040 0.2349956759 - - PREDICTED: uncharacterized protein LOC105775709 [Gossypium raimondii]
18 Hb_000072_260 0.2349956759 - - hypothetical protein MTR_5g044090 [Medicago truncatula]
19 Hb_000081_170 0.2349956759 - - -
20 Hb_000088_250 0.2349956759 - - -

Gene co-expression network

sample Hb_000795_010 Hb_000795_010 Hb_004829_020 Hb_004829_020 Hb_000795_010--Hb_004829_020 Hb_012340_040 Hb_012340_040 Hb_000795_010--Hb_012340_040 Hb_006692_050 Hb_006692_050 Hb_000795_010--Hb_006692_050 Hb_007761_010 Hb_007761_010 Hb_000795_010--Hb_007761_010 Hb_128173_010 Hb_128173_010 Hb_000795_010--Hb_128173_010 Hb_042026_010 Hb_042026_010 Hb_000795_010--Hb_042026_010 Hb_004829_020--Hb_012340_040 Hb_004282_030 Hb_004282_030 Hb_004829_020--Hb_004282_030 Hb_000174_280 Hb_000174_280 Hb_004829_020--Hb_000174_280 Hb_004829_020--Hb_007761_010 Hb_004829_020--Hb_128173_010 Hb_012340_040--Hb_004282_030 Hb_012340_040--Hb_000174_280 Hb_012340_040--Hb_007761_010 Hb_012340_040--Hb_128173_010 Hb_006692_050--Hb_042026_010 Hb_006692_050--Hb_007761_010 Hb_006692_050--Hb_128173_010 Hb_111332_010 Hb_111332_010 Hb_006692_050--Hb_111332_010 Hb_105480_010 Hb_105480_010 Hb_006692_050--Hb_105480_010 Hb_007761_010--Hb_128173_010 Hb_007761_010--Hb_111332_010 Hb_007761_010--Hb_105480_010 Hb_005542_020 Hb_005542_020 Hb_007761_010--Hb_005542_020 Hb_013727_010 Hb_013727_010 Hb_007761_010--Hb_013727_010 Hb_128173_010--Hb_111332_010 Hb_128173_010--Hb_105480_010 Hb_128173_010--Hb_005542_020 Hb_128173_010--Hb_013727_010 Hb_000005_210 Hb_000005_210 Hb_042026_010--Hb_000005_210 Hb_000041_170 Hb_000041_170 Hb_042026_010--Hb_000041_170 Hb_000047_040 Hb_000047_040 Hb_042026_010--Hb_000047_040 Hb_000072_260 Hb_000072_260 Hb_042026_010--Hb_000072_260 Hb_000081_170 Hb_000081_170 Hb_042026_010--Hb_000081_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.949904 10.9963
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.355996 0

CAGE analysis