Hb_000802_120

Information

Type -
Description -
Location Contig802: 133586-136522
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58839: 132058-132688 , PASA_asmbl_58840: 132697-133028
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000802_120 0.0 - - -
2 Hb_001369_450 0.2441564316 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
3 Hb_023732_040 0.2523662786 - - cytochrome P450, putative [Ricinus communis]
4 Hb_000990_060 0.2574709464 - - PREDICTED: protein EMBRYONIC FLOWER 1 [Jatropha curcas]
5 Hb_009314_010 0.2585043097 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
6 Hb_004333_020 0.2643036075 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
7 Hb_002046_070 0.2671207115 transcription factor TF Family: AUX/IAA PREDICTED: auxin-induced protein 22D-like isoform X1 [Populus euphratica]
8 Hb_003777_050 0.2718364565 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105629120 [Jatropha curcas]
9 Hb_167776_030 0.271914031 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
10 Hb_004032_260 0.2719952004 - - PREDICTED: uncharacterized protein LOC105635147 [Jatropha curcas]
11 Hb_000016_190 0.2770499334 - - ABC transporter B family member 28 [Glycine soja]
12 Hb_024468_020 0.2816629333 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
13 Hb_006573_180 0.2843335525 transcription factor TF Family: WRKY hypothetical protein RCOM_1581940 [Ricinus communis]
14 Hb_003209_060 0.2844437562 - - -
15 Hb_007305_030 0.2904056035 - - serine-threonine protein kinase, putative [Ricinus communis]
16 Hb_161785_010 0.2939574722 - - PREDICTED: uncharacterized protein LOC105785094 [Gossypium raimondii]
17 Hb_003599_070 0.3003790658 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_005914_070 0.300530918 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002110_020 0.3006373216 - - PREDICTED: transcription factor bHLH145 [Jatropha curcas]
20 Hb_000141_030 0.3048471772 - - PREDICTED: scarecrow-like protein 22 [Jatropha curcas]

Gene co-expression network

sample Hb_000802_120 Hb_000802_120 Hb_001369_450 Hb_001369_450 Hb_000802_120--Hb_001369_450 Hb_023732_040 Hb_023732_040 Hb_000802_120--Hb_023732_040 Hb_000990_060 Hb_000990_060 Hb_000802_120--Hb_000990_060 Hb_009314_010 Hb_009314_010 Hb_000802_120--Hb_009314_010 Hb_004333_020 Hb_004333_020 Hb_000802_120--Hb_004333_020 Hb_002046_070 Hb_002046_070 Hb_000802_120--Hb_002046_070 Hb_012545_050 Hb_012545_050 Hb_001369_450--Hb_012545_050 Hb_002067_140 Hb_002067_140 Hb_001369_450--Hb_002067_140 Hb_001776_170 Hb_001776_170 Hb_001369_450--Hb_001776_170 Hb_002759_240 Hb_002759_240 Hb_001369_450--Hb_002759_240 Hb_001511_140 Hb_001511_140 Hb_001369_450--Hb_001511_140 Hb_000979_250 Hb_000979_250 Hb_001369_450--Hb_000979_250 Hb_000477_080 Hb_000477_080 Hb_023732_040--Hb_000477_080 Hb_000172_570 Hb_000172_570 Hb_023732_040--Hb_000172_570 Hb_001277_090 Hb_001277_090 Hb_023732_040--Hb_001277_090 Hb_004460_010 Hb_004460_010 Hb_023732_040--Hb_004460_010 Hb_023732_040--Hb_009314_010 Hb_000094_130 Hb_000094_130 Hb_023732_040--Hb_000094_130 Hb_024468_020 Hb_024468_020 Hb_000990_060--Hb_024468_020 Hb_000016_190 Hb_000016_190 Hb_000990_060--Hb_000016_190 Hb_003777_050 Hb_003777_050 Hb_000990_060--Hb_003777_050 Hb_000239_020 Hb_000239_020 Hb_000990_060--Hb_000239_020 Hb_055101_010 Hb_055101_010 Hb_000990_060--Hb_055101_010 Hb_004785_140 Hb_004785_140 Hb_000990_060--Hb_004785_140 Hb_000161_150 Hb_000161_150 Hb_009314_010--Hb_000161_150 Hb_000432_050 Hb_000432_050 Hb_009314_010--Hb_000432_050 Hb_006816_450 Hb_006816_450 Hb_009314_010--Hb_006816_450 Hb_002756_020 Hb_002756_020 Hb_009314_010--Hb_002756_020 Hb_005224_010 Hb_005224_010 Hb_009314_010--Hb_005224_010 Hb_000771_130 Hb_000771_130 Hb_009314_010--Hb_000771_130 Hb_005914_070 Hb_005914_070 Hb_004333_020--Hb_005914_070 Hb_000392_330 Hb_000392_330 Hb_004333_020--Hb_000392_330 Hb_003086_130 Hb_003086_130 Hb_004333_020--Hb_003086_130 Hb_004333_020--Hb_001369_450 Hb_004333_020--Hb_009314_010 Hb_004333_020--Hb_000771_130 Hb_004032_260 Hb_004032_260 Hb_002046_070--Hb_004032_260 Hb_012053_060 Hb_012053_060 Hb_002046_070--Hb_012053_060 Hb_006573_180 Hb_006573_180 Hb_002046_070--Hb_006573_180 Hb_002046_070--Hb_023732_040 Hb_002046_070--Hb_000990_060 Hb_000077_060 Hb_000077_060 Hb_002046_070--Hb_000077_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.321867 0.64187 0.159731 0 0.0482173 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.478624 0.65812 1.93776 0.233087 0

CAGE analysis