Hb_000803_040

Information

Type -
Description -
Location Contig803: 108836-111063
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000803_040 0.0 - - -
2 Hb_032202_030 0.1815820187 - - -
3 Hb_000749_080 0.1974307213 - - Alpha-expansin 12 precursor, putative [Ricinus communis]
4 Hb_148891_010 0.2606633346 - - -
5 Hb_000529_240 0.2670219454 - - -
6 Hb_003322_010 0.2771814965 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
7 Hb_000445_190 0.2774643057 - - -
8 Hb_000208_030 0.2870301846 - - -
9 Hb_002685_180 0.2909193886 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
10 Hb_000567_040 0.2963423667 - - PREDICTED: uncharacterized protein LOC105649657 [Jatropha curcas]
11 Hb_127008_010 0.2993547367 - - PREDICTED: uncharacterized protein LOC105629501 [Jatropha curcas]
12 Hb_000179_150 0.3021901983 - - hypothetical protein ZEAMMB73_153699 [Zea mays]
13 Hb_001495_060 0.3022955514 - - PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
14 Hb_001377_400 0.3026664654 - - neutral/alkaline invertase [Manihot esculenta]
15 Hb_000453_210 0.3029720781 - - hypothetical protein PHAVU_006G019800g [Phaseolus vulgaris]
16 Hb_011689_130 0.3059187454 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 [Jatropha curcas]
17 Hb_004931_010 0.3061035332 - - inosine triphosphate pyrophosphatase, putative [Ricinus communis]
18 Hb_000987_090 0.3076790054 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
19 Hb_003209_030 0.3084841413 - - PREDICTED: heparanase-like protein 2 [Jatropha curcas]
20 Hb_000200_320 0.3105375836 transcription factor TF Family: AUX/IAA hypothetical protein JCGZ_09311 [Jatropha curcas]

Gene co-expression network

sample Hb_000803_040 Hb_000803_040 Hb_032202_030 Hb_032202_030 Hb_000803_040--Hb_032202_030 Hb_000749_080 Hb_000749_080 Hb_000803_040--Hb_000749_080 Hb_148891_010 Hb_148891_010 Hb_000803_040--Hb_148891_010 Hb_000529_240 Hb_000529_240 Hb_000803_040--Hb_000529_240 Hb_003322_010 Hb_003322_010 Hb_000803_040--Hb_003322_010 Hb_000445_190 Hb_000445_190 Hb_000803_040--Hb_000445_190 Hb_032202_030--Hb_148891_010 Hb_032202_030--Hb_000445_190 Hb_000567_040 Hb_000567_040 Hb_032202_030--Hb_000567_040 Hb_002685_180 Hb_002685_180 Hb_032202_030--Hb_002685_180 Hb_032202_030--Hb_000529_240 Hb_037964_010 Hb_037964_010 Hb_000749_080--Hb_037964_010 Hb_001186_080 Hb_001186_080 Hb_000749_080--Hb_001186_080 Hb_000111_230 Hb_000111_230 Hb_000749_080--Hb_000111_230 Hb_000749_080--Hb_003322_010 Hb_000987_090 Hb_000987_090 Hb_000749_080--Hb_000987_090 Hb_148891_010--Hb_000445_190 Hb_004102_030 Hb_004102_030 Hb_148891_010--Hb_004102_030 Hb_001017_080 Hb_001017_080 Hb_148891_010--Hb_001017_080 Hb_004931_010 Hb_004931_010 Hb_148891_010--Hb_004931_010 Hb_001495_060 Hb_001495_060 Hb_148891_010--Hb_001495_060 Hb_003209_030 Hb_003209_030 Hb_000529_240--Hb_003209_030 Hb_000529_240--Hb_001495_060 Hb_008667_050 Hb_008667_050 Hb_000529_240--Hb_008667_050 Hb_000331_320 Hb_000331_320 Hb_000529_240--Hb_000331_320 Hb_001047_140 Hb_001047_140 Hb_000529_240--Hb_001047_140 Hb_000453_210 Hb_000453_210 Hb_000529_240--Hb_000453_210 Hb_003322_010--Hb_004931_010 Hb_001221_560 Hb_001221_560 Hb_003322_010--Hb_001221_560 Hb_003020_080 Hb_003020_080 Hb_003322_010--Hb_003020_080 Hb_000098_290 Hb_000098_290 Hb_003322_010--Hb_000098_290 Hb_001377_400 Hb_001377_400 Hb_003322_010--Hb_001377_400 Hb_069022_010 Hb_069022_010 Hb_000445_190--Hb_069022_010 Hb_000099_230 Hb_000099_230 Hb_000445_190--Hb_000099_230 Hb_000445_190--Hb_001017_080 Hb_005714_050 Hb_005714_050 Hb_000445_190--Hb_005714_050 Hb_032974_010 Hb_032974_010 Hb_000445_190--Hb_032974_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.293895 1.85013 1.43605 0 1.8971 0.201365
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.33171 4.1826 0 0.355082 0

CAGE analysis