Hb_000803_180

Information

Type -
Description -
Location Contig803: 232263-237677
Sequence    

Annotation

kegg
ID rcu:RCOM_1578950
description hexokinase, putative (EC:2.7.1.1)
nr
ID AHY84733.1
description hexokinase [Manihot esculenta]
swissprot
ID Q9LPS1
description Hexokinase-3 OS=Arabidopsis thaliana GN=At1g50460 PE=1 SV=1
trembl
ID A0A023ZZ71
description Hexokinase OS=Manihot esculenta GN=HXK4 PE=2 SV=1
Gene Ontology
ID GO:0004396
description hexokinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58902: 232337-237375
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000803_180 0.0 - - hexokinase [Manihot esculenta]
2 Hb_000261_280 0.0717180965 - - BnaA10g23810D [Brassica napus]
3 Hb_152910_010 0.087413412 - - PREDICTED: uncharacterized protein LOC105632212 [Jatropha curcas]
4 Hb_002311_140 0.0936222438 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 15-like [Jatropha curcas]
5 Hb_172257_010 0.0958082695 transcription factor TF Family: HMG high mobility group family protein [Populus trichocarpa]
6 Hb_004319_050 0.1012515294 - - PREDICTED: senescence-associated carboxylesterase 101-like [Populus euphratica]
7 Hb_003849_220 0.1063589008 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
8 Hb_000796_120 0.1068069579 - - PREDICTED: SWR1-complex protein 4 isoform X3 [Jatropha curcas]
9 Hb_004526_010 0.1075769056 - - signal recognition particle receptor alpha subunit, putative [Ricinus communis]
10 Hb_102438_030 0.1086638082 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 37-like isoform X1 [Jatropha curcas]
11 Hb_000784_080 0.1099133922 - - protein disulfide isomerase, putative [Ricinus communis]
12 Hb_000640_190 0.110340903 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
13 Hb_001009_120 0.1107739602 - - PREDICTED: transcription factor GTE10 isoform X2 [Jatropha curcas]
14 Hb_002553_010 0.1124426658 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 2-like [Populus euphratica]
15 Hb_000866_450 0.1128425475 - - dead box ATP-dependent RNA helicase, putative [Ricinus communis]
16 Hb_000034_110 0.1131437189 - - sentrin/sumo-specific protease, putative [Ricinus communis]
17 Hb_003018_030 0.1133654204 - - PREDICTED: GDP-mannose 4,6 dehydratase 1 [Jatropha curcas]
18 Hb_009178_010 0.113583965 - - PREDICTED: uncharacterized protein LOC105637474 [Jatropha curcas]
19 Hb_000958_080 0.1144167834 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000671_060 0.1148849863 - - protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000803_180 Hb_000803_180 Hb_000261_280 Hb_000261_280 Hb_000803_180--Hb_000261_280 Hb_152910_010 Hb_152910_010 Hb_000803_180--Hb_152910_010 Hb_002311_140 Hb_002311_140 Hb_000803_180--Hb_002311_140 Hb_172257_010 Hb_172257_010 Hb_000803_180--Hb_172257_010 Hb_004319_050 Hb_004319_050 Hb_000803_180--Hb_004319_050 Hb_003849_220 Hb_003849_220 Hb_000803_180--Hb_003849_220 Hb_000418_050 Hb_000418_050 Hb_000261_280--Hb_000418_050 Hb_003777_130 Hb_003777_130 Hb_000261_280--Hb_003777_130 Hb_000796_120 Hb_000796_120 Hb_000261_280--Hb_000796_120 Hb_033152_090 Hb_033152_090 Hb_000261_280--Hb_033152_090 Hb_000261_280--Hb_004319_050 Hb_152910_010--Hb_172257_010 Hb_030545_030 Hb_030545_030 Hb_152910_010--Hb_030545_030 Hb_152910_010--Hb_004319_050 Hb_000302_170 Hb_000302_170 Hb_152910_010--Hb_000302_170 Hb_000300_550 Hb_000300_550 Hb_152910_010--Hb_000300_550 Hb_000640_190 Hb_000640_190 Hb_152910_010--Hb_000640_190 Hb_085364_010 Hb_085364_010 Hb_002311_140--Hb_085364_010 Hb_000671_060 Hb_000671_060 Hb_002311_140--Hb_000671_060 Hb_002311_140--Hb_000261_280 Hb_003078_030 Hb_003078_030 Hb_002311_140--Hb_003078_030 Hb_000163_230 Hb_000163_230 Hb_002311_140--Hb_000163_230 Hb_005322_050 Hb_005322_050 Hb_172257_010--Hb_005322_050 Hb_172257_010--Hb_000300_550 Hb_007163_060 Hb_007163_060 Hb_172257_010--Hb_007163_060 Hb_009449_060 Hb_009449_060 Hb_172257_010--Hb_009449_060 Hb_172257_010--Hb_000302_170 Hb_005288_140 Hb_005288_140 Hb_004319_050--Hb_005288_140 Hb_004526_010 Hb_004526_010 Hb_004319_050--Hb_004526_010 Hb_004319_050--Hb_000796_120 Hb_002903_140 Hb_002903_140 Hb_004319_050--Hb_002903_140 Hb_011249_060 Hb_011249_060 Hb_004319_050--Hb_011249_060 Hb_000671_080 Hb_000671_080 Hb_003849_220--Hb_000671_080 Hb_001257_100 Hb_001257_100 Hb_003849_220--Hb_001257_100 Hb_003849_220--Hb_000261_280 Hb_000671_030 Hb_000671_030 Hb_003849_220--Hb_000671_030 Hb_003849_220--Hb_005288_140 Hb_003849_220--Hb_003777_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.72574 6.61851 6.98525 4.45558 3.78031 1.44875
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.18154 1.90452 0.896857 2.83911 2.37831

CAGE analysis