Hb_000808_220

Information

Type -
Description -
Location Contig808: 233041-245073
Sequence    

Annotation

kegg
ID rcu:RCOM_1434780
description Pyrophosphate-energized vacuolar membrane proton pump, putative (EC:1.3.1.74)
nr
ID XP_012088873.1
description PREDICTED: pyrophosphate-energized vacuolar membrane proton pump 1-like [Jatropha curcas]
swissprot
ID Q06572
description Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum vulgare PE=2 SV=2
trembl
ID A0A067JHN7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23210 PE=3 SV=1
Gene Ontology
ID GO:0016020
description pyrophosphate-energized vacuolar membrane proton pump 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59099: 233054-237065 , PASA_asmbl_59100: 233051-236982 , PASA_asmbl_59105: 242781-243020
cDNA
(Sanger)
(ID:Location)		 035_H13.ab1: 235711-236982

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000808_220 0.0 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump 1-like [Jatropha curcas]
2 Hb_001085_230 0.1142768352 - - PREDICTED: receptor like protein kinase S.2 [Jatropha curcas]
3 Hb_109489_010 0.118895674 - - multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
4 Hb_001946_060 0.1274681325 - - PREDICTED: TBC1 domain family member 13-like isoform X1 [Jatropha curcas]
5 Hb_001675_130 0.1359707002 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
6 Hb_007919_030 0.1411647729 - - -
7 Hb_000377_160 0.1447081715 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]
8 Hb_000649_280 0.1510495492 - - PREDICTED: F-box protein PP2-B10-like [Pyrus x bretschneideri]
9 Hb_003767_010 0.1522135423 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
10 Hb_002217_200 0.1540933541 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
11 Hb_000037_010 0.1554956253 - - PREDICTED: cation/H(+) antiporter 18-like [Jatropha curcas]
12 Hb_000163_250 0.1599961342 - - unnamed protein product [Vitis vinifera]
13 Hb_123560_050 0.160098612 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
14 Hb_000563_120 0.1606008024 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
15 Hb_005470_040 0.1678177107 - - hypothetical protein POPTR_0015s09760g [Populus trichocarpa]
16 Hb_000059_080 0.1685990111 - - PREDICTED: uncharacterized protein LOC105629177 [Jatropha curcas]
17 Hb_001091_020 0.1710296236 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
18 Hb_001819_010 0.17146972 - - PREDICTED: potassium transporter 8 [Jatropha curcas]
19 Hb_000264_340 0.1725540562 - - PREDICTED: callose synthase 11-like isoform X1 [Jatropha curcas]
20 Hb_003106_210 0.1786813415 - - PREDICTED: UDP-glycosyltransferase 74B1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000808_220 Hb_000808_220 Hb_001085_230 Hb_001085_230 Hb_000808_220--Hb_001085_230 Hb_109489_010 Hb_109489_010 Hb_000808_220--Hb_109489_010 Hb_001946_060 Hb_001946_060 Hb_000808_220--Hb_001946_060 Hb_001675_130 Hb_001675_130 Hb_000808_220--Hb_001675_130 Hb_007919_030 Hb_007919_030 Hb_000808_220--Hb_007919_030 Hb_000377_160 Hb_000377_160 Hb_000808_220--Hb_000377_160 Hb_000037_010 Hb_000037_010 Hb_001085_230--Hb_000037_010 Hb_001819_010 Hb_001819_010 Hb_001085_230--Hb_001819_010 Hb_123560_050 Hb_123560_050 Hb_001085_230--Hb_123560_050 Hb_000563_120 Hb_000563_120 Hb_001085_230--Hb_000563_120 Hb_001085_230--Hb_007919_030 Hb_001085_230--Hb_000377_160 Hb_003767_010 Hb_003767_010 Hb_109489_010--Hb_003767_010 Hb_005470_040 Hb_005470_040 Hb_109489_010--Hb_005470_040 Hb_000264_340 Hb_000264_340 Hb_109489_010--Hb_000264_340 Hb_109489_010--Hb_123560_050 Hb_029866_110 Hb_029866_110 Hb_109489_010--Hb_029866_110 Hb_000163_250 Hb_000163_250 Hb_001946_060--Hb_000163_250 Hb_001946_060--Hb_001085_230 Hb_001946_060--Hb_007919_030 Hb_001946_060--Hb_000037_010 Hb_002518_270 Hb_002518_270 Hb_001946_060--Hb_002518_270 Hb_000254_150 Hb_000254_150 Hb_001675_130--Hb_000254_150 Hb_001675_130--Hb_007919_030 Hb_000684_010 Hb_000684_010 Hb_001675_130--Hb_000684_010 Hb_001675_130--Hb_003767_010 Hb_000649_280 Hb_000649_280 Hb_001675_130--Hb_000649_280 Hb_010813_030 Hb_010813_030 Hb_001675_130--Hb_010813_030 Hb_007919_030--Hb_000163_250 Hb_002217_200 Hb_002217_200 Hb_007919_030--Hb_002217_200 Hb_007919_030--Hb_001819_010 Hb_000377_160--Hb_000649_280 Hb_000377_160--Hb_003767_010 Hb_000377_160--Hb_123560_050 Hb_000377_160--Hb_005470_040 Hb_000377_160--Hb_000563_120 Hb_031949_010 Hb_031949_010 Hb_000377_160--Hb_031949_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.12816 188.674 46.3915 41.6347 19.8521 1.41232
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.184535 0.145218 0.0397416 178.335 136.277

CAGE analysis