Hb_000809_010

Information

Type -
Description -
Location Contig809: 4837-5685
Sequence    

Annotation

kegg
ID pop:POPTR_0007s11550g
description hypothetical protein
nr
ID KDP31881.1
description hypothetical protein JCGZ_12342 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K6L5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12342 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000809_010 0.0 - - hypothetical protein JCGZ_12342 [Jatropha curcas]
2 Hb_008441_010 0.0599339333 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
3 Hb_000654_020 0.0643922261 - - hypothetical protein CICLE_v10006262mg [Citrus clementina]
4 Hb_010883_160 0.0737688569 - - PREDICTED: pathogenesis-related protein 5 isoform X1 [Jatropha curcas]
5 Hb_002073_130 0.0767430496 - - PREDICTED: uncharacterized protein LOC100246830 [Vitis vinifera]
6 Hb_132880_010 0.0947799804 - - PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]
7 Hb_000076_240 0.0983008328 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
8 Hb_000402_060 0.1016672335 - - PREDICTED: uncharacterized protein LOC105644642 isoform X2 [Jatropha curcas]
9 Hb_003549_100 0.106009661 - - PREDICTED: uncharacterized protein LOC105647410 [Jatropha curcas]
10 Hb_061256_020 0.1072019054 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
11 Hb_004943_020 0.1081190783 - - cationic amino acid transporter, putative [Ricinus communis]
12 Hb_003025_170 0.1137083358 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Jatropha curcas]
13 Hb_002809_180 0.1141971715 - - PREDICTED: homeobox protein HD1 [Jatropha curcas]
14 Hb_007163_110 0.1142914811 - - PREDICTED: kinesin-like protein KIF19 [Jatropha curcas]
15 Hb_005539_150 0.1151832279 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 33 [Jatropha curcas]
16 Hb_001397_020 0.1152079106 - - cytochrome P450 family protein [Populus trichocarpa]
17 Hb_002326_010 0.1171817377 transcription factor TF Family: G2-like hypothetical protein RCOM_1592640 [Ricinus communis]
18 Hb_000224_190 0.1172370054 - - zinc finger protein, putative [Ricinus communis]
19 Hb_000343_070 0.1179133478 - - hypothetical protein JCGZ_06265 [Jatropha curcas]
20 Hb_001593_040 0.1196462474 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]

Gene co-expression network

sample Hb_000809_010 Hb_000809_010 Hb_008441_010 Hb_008441_010 Hb_000809_010--Hb_008441_010 Hb_000654_020 Hb_000654_020 Hb_000809_010--Hb_000654_020 Hb_010883_160 Hb_010883_160 Hb_000809_010--Hb_010883_160 Hb_002073_130 Hb_002073_130 Hb_000809_010--Hb_002073_130 Hb_132880_010 Hb_132880_010 Hb_000809_010--Hb_132880_010 Hb_000076_240 Hb_000076_240 Hb_000809_010--Hb_000076_240 Hb_008441_010--Hb_000654_020 Hb_041139_010 Hb_041139_010 Hb_008441_010--Hb_041139_010 Hb_008253_050 Hb_008253_050 Hb_008441_010--Hb_008253_050 Hb_001104_220 Hb_001104_220 Hb_008441_010--Hb_001104_220 Hb_008441_010--Hb_002073_130 Hb_000654_020--Hb_010883_160 Hb_005539_150 Hb_005539_150 Hb_000654_020--Hb_005539_150 Hb_002245_060 Hb_002245_060 Hb_000654_020--Hb_002245_060 Hb_000402_060 Hb_000402_060 Hb_000654_020--Hb_000402_060 Hb_001397_020 Hb_001397_020 Hb_010883_160--Hb_001397_020 Hb_000029_210 Hb_000029_210 Hb_010883_160--Hb_000029_210 Hb_003549_100 Hb_003549_100 Hb_010883_160--Hb_003549_100 Hb_010883_160--Hb_000402_060 Hb_010883_160--Hb_000076_240 Hb_002073_130--Hb_132880_010 Hb_001593_040 Hb_001593_040 Hb_002073_130--Hb_001593_040 Hb_064445_020 Hb_064445_020 Hb_002073_130--Hb_064445_020 Hb_002073_130--Hb_010883_160 Hb_003151_020 Hb_003151_020 Hb_002073_130--Hb_003151_020 Hb_132880_010--Hb_003549_100 Hb_095744_010 Hb_095744_010 Hb_132880_010--Hb_095744_010 Hb_144550_010 Hb_144550_010 Hb_132880_010--Hb_144550_010 Hb_002326_010 Hb_002326_010 Hb_132880_010--Hb_002326_010 Hb_132880_010--Hb_001593_040 Hb_000076_240--Hb_003549_100 Hb_000076_240--Hb_132880_010 Hb_000076_240--Hb_001397_020 Hb_003152_020 Hb_003152_020 Hb_000076_240--Hb_003152_020 Hb_136408_040 Hb_136408_040 Hb_000076_240--Hb_136408_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.106919 0.333957 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0198267 0.396328

CAGE analysis