Hb_000809_090

Information

Type -
Description -
Location Contig809: 92264-105628
Sequence    

Annotation

kegg
ID rcu:RCOM_0602000
description hypothetical protein
nr
ID XP_012079184.1
description PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X1 [Jatropha curcas]
swissprot
ID Q9CAD5
description Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1
trembl
ID A0A067K6M6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12352 PE=4 SV=1
Gene Ontology
ID GO:0005886
description mitogen-activated protein kinase kinase kinase anp1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59142: 97519-98276 , PASA_asmbl_59143: 97793-98308 , PASA_asmbl_59144: 92503-98208
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000809_090 0.0 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X1 [Jatropha curcas]
2 Hb_005496_180 0.1459307505 - - PREDICTED: U-box domain-containing protein 4-like [Jatropha curcas]
3 Hb_002026_060 0.1515590416 - - PREDICTED: uncharacterized protein LOC105645786 [Jatropha curcas]
4 Hb_003605_240 0.1539406607 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
5 Hb_000179_240 0.1705899563 - - PREDICTED: threonine synthase 1, chloroplastic [Jatropha curcas]
6 Hb_000318_480 0.1723296657 - - PREDICTED: RING-H2 finger protein ATL65 [Jatropha curcas]
7 Hb_000483_040 0.1735655473 - - Cell division protein ftsH, putative [Ricinus communis]
8 Hb_001472_130 0.1745378713 - - PREDICTED: uncharacterized protein LOC105645786 [Jatropha curcas]
9 Hb_002053_130 0.1788487373 - - UDP-glucose 4-epimerase, putative [Ricinus communis]
10 Hb_028207_040 0.1804212234 - - PREDICTED: beta-hexosaminidase 2 [Jatropha curcas]
11 Hb_004208_140 0.1824733588 - - PREDICTED: probable receptor-like protein kinase At5g47070 [Jatropha curcas]
12 Hb_000215_350 0.1852784357 - - PREDICTED: uncharacterized protein LOC104901272 [Beta vulgaris subsp. vulgaris]
13 Hb_000805_230 0.1906492706 - - PREDICTED: oxysterol-binding protein-related protein 3C-like [Jatropha curcas]
14 Hb_003055_140 0.1970268036 transcription factor TF Family: SNF2 PREDICTED: uncharacterized protein LOC105649495 [Jatropha curcas]
15 Hb_003411_030 0.1978643779 - - hypothetical protein POPTR_0010s13590g [Populus trichocarpa]
16 Hb_000953_050 0.1990034491 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105629451 [Jatropha curcas]
17 Hb_000634_070 0.199119696 - - PREDICTED: probable receptor-like protein kinase At5g47070 [Jatropha curcas]
18 Hb_001369_570 0.1994985493 - - hypothetical protein JCGZ_26236 [Jatropha curcas]
19 Hb_000417_420 0.2007296014 - - PREDICTED: U-box domain-containing protein 17 [Jatropha curcas]
20 Hb_002915_070 0.2047160172 - - PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000809_090 Hb_000809_090 Hb_005496_180 Hb_005496_180 Hb_000809_090--Hb_005496_180 Hb_002026_060 Hb_002026_060 Hb_000809_090--Hb_002026_060 Hb_003605_240 Hb_003605_240 Hb_000809_090--Hb_003605_240 Hb_000179_240 Hb_000179_240 Hb_000809_090--Hb_000179_240 Hb_000318_480 Hb_000318_480 Hb_000809_090--Hb_000318_480 Hb_000483_040 Hb_000483_040 Hb_000809_090--Hb_000483_040 Hb_000953_050 Hb_000953_050 Hb_005496_180--Hb_000953_050 Hb_002572_050 Hb_002572_050 Hb_005496_180--Hb_002572_050 Hb_000805_230 Hb_000805_230 Hb_005496_180--Hb_000805_230 Hb_000120_160 Hb_000120_160 Hb_005496_180--Hb_000120_160 Hb_002053_130 Hb_002053_130 Hb_005496_180--Hb_002053_130 Hb_002915_070 Hb_002915_070 Hb_005496_180--Hb_002915_070 Hb_002026_060--Hb_005496_180 Hb_014068_050 Hb_014068_050 Hb_002026_060--Hb_014068_050 Hb_000634_070 Hb_000634_070 Hb_002026_060--Hb_000634_070 Hb_000976_290 Hb_000976_290 Hb_002026_060--Hb_000976_290 Hb_002097_200 Hb_002097_200 Hb_002026_060--Hb_002097_200 Hb_002701_220 Hb_002701_220 Hb_003605_240--Hb_002701_220 Hb_000976_280 Hb_000976_280 Hb_003605_240--Hb_000976_280 Hb_001123_200 Hb_001123_200 Hb_003605_240--Hb_001123_200 Hb_000364_040 Hb_000364_040 Hb_003605_240--Hb_000364_040 Hb_006909_060 Hb_006909_060 Hb_003605_240--Hb_006909_060 Hb_003605_240--Hb_005496_180 Hb_002685_200 Hb_002685_200 Hb_000179_240--Hb_002685_200 Hb_000186_200 Hb_000186_200 Hb_000179_240--Hb_000186_200 Hb_000179_240--Hb_002053_130 Hb_000084_240 Hb_000084_240 Hb_000179_240--Hb_000084_240 Hb_000925_030 Hb_000925_030 Hb_000179_240--Hb_000925_030 Hb_002205_010 Hb_002205_010 Hb_000179_240--Hb_002205_010 Hb_000111_180 Hb_000111_180 Hb_000318_480--Hb_000111_180 Hb_000318_480--Hb_014068_050 Hb_002301_170 Hb_002301_170 Hb_000318_480--Hb_002301_170 Hb_052764_030 Hb_052764_030 Hb_000318_480--Hb_052764_030 Hb_009486_160 Hb_009486_160 Hb_000318_480--Hb_009486_160 Hb_000215_350 Hb_000215_350 Hb_000318_480--Hb_000215_350 Hb_003494_060 Hb_003494_060 Hb_000483_040--Hb_003494_060 Hb_028207_040 Hb_028207_040 Hb_000483_040--Hb_028207_040 Hb_012760_010 Hb_012760_010 Hb_000483_040--Hb_012760_010 Hb_000069_230 Hb_000069_230 Hb_000483_040--Hb_000069_230 Hb_001369_570 Hb_001369_570 Hb_000483_040--Hb_001369_570 Hb_003078_050 Hb_003078_050 Hb_000483_040--Hb_003078_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.58993 39.3166 12.2722 6.93311 6.57594 2.40979
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.71798 9.58082 15.8152 5.18682 5.32845

CAGE analysis